Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632704_at:

>probe:Drosophila_2:1632704_at:636:311; Interrogation_Position=1195; Antisense; GCCAAGTGGACTGCGCCGATTCAGA
>probe:Drosophila_2:1632704_at:318:463; Interrogation_Position=1212; Antisense; GATTCAGACTCAGGCCGTTTACGAA
>probe:Drosophila_2:1632704_at:208:477; Interrogation_Position=1228; Antisense; GTTTACGAATTCGTGGCTCGCAGCC
>probe:Drosophila_2:1632704_at:415:103; Interrogation_Position=1313; Antisense; AGACGCTCAATCTGCTGAACACCGG
>probe:Drosophila_2:1632704_at:209:307; Interrogation_Position=1367; Antisense; CCTCCGGCATCATTCCAATTAGTTA
>probe:Drosophila_2:1632704_at:431:445; Interrogation_Position=1422; Antisense; GATGCAGGATCAAACCAAGCCCGCT
>probe:Drosophila_2:1632704_at:373:141; Interrogation_Position=1461; Antisense; ACTAATGAATTTGTCCGCGGGAGCC
>probe:Drosophila_2:1632704_at:200:613; Interrogation_Position=1514; Antisense; TGAACTACGACTTTAACCTGGCTGC
>probe:Drosophila_2:1632704_at:286:435; Interrogation_Position=1591; Antisense; GAGGGATTCGCCTGAGCCGACCAAA
>probe:Drosophila_2:1632704_at:329:707; Interrogation_Position=1638; Antisense; TTAAGTTACGTTCCGTTCAGCTTCT
>probe:Drosophila_2:1632704_at:501:343; Interrogation_Position=1657; Antisense; GCTTCTGTATATGTACGTCCACGTC
>probe:Drosophila_2:1632704_at:111:627; Interrogation_Position=1674; Antisense; TCCACGTCCCTGTATTTTAGGTTAG
>probe:Drosophila_2:1632704_at:720:115; Interrogation_Position=1697; Antisense; AGCTTCCGCCTTTTGTATATTTCCA
>probe:Drosophila_2:1632704_at:189:603; Interrogation_Position=1734; Antisense; TGTTTATTAGCCAGCGATCCCAATG

Paste this into a BLAST search page for me
GCCAAGTGGACTGCGCCGATTCAGAGATTCAGACTCAGGCCGTTTACGAAGTTTACGAATTCGTGGCTCGCAGCCAGACGCTCAATCTGCTGAACACCGGCCTCCGGCATCATTCCAATTAGTTAGATGCAGGATCAAACCAAGCCCGCTACTAATGAATTTGTCCGCGGGAGCCTGAACTACGACTTTAACCTGGCTGCGAGGGATTCGCCTGAGCCGACCAAATTAAGTTACGTTCCGTTCAGCTTCTGCTTCTGTATATGTACGTCCACGTCTCCACGTCCCTGTATTTTAGGTTAGAGCTTCCGCCTTTTGTATATTTCCATGTTTATTAGCCAGCGATCCCAATG

Full Affymetrix probeset data:

Annotations for 1632704_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime