FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632858_a_at:

>probe:Drosophila_2:1632858_a_at:716:469; Interrogation_Position=2346; Antisense; GTTCCAGGCGCTCGAAGTCACGAAG
>probe:Drosophila_2:1632858_a_at:625:631; Interrogation_Position=2375; Antisense; TCCCACTACCGAAAGTCATCTTACT
>probe:Drosophila_2:1632858_a_at:340:709; Interrogation_Position=2395; Antisense; TTACTCATCGAGATCCAGGCGCAGC
>probe:Drosophila_2:1632858_a_at:663:357; Interrogation_Position=2445; Antisense; GCAAAACGCCGTCACAGCGCAAGAA
>probe:Drosophila_2:1632858_a_at:453:367; Interrogation_Position=2467; Antisense; GAATCGAAAGCTGGCGTCTACGCGC
>probe:Drosophila_2:1632858_a_at:709:577; Interrogation_Position=2573; Antisense; GGCCGACATCGTAGCAGTCGCAGTA
>probe:Drosophila_2:1632858_a_at:484:379; Interrogation_Position=2604; Antisense; GAAGCCGCAGCCATACGCCGAAAGA
>probe:Drosophila_2:1632858_a_at:352:211; Interrogation_Position=2625; Antisense; AAGAAGTCATCCTGGAGGCCGACAA
>probe:Drosophila_2:1632858_a_at:322:207; Interrogation_Position=2648; Antisense; AAGCTGGTGGCTTCTGCCGAGAAAA
>probe:Drosophila_2:1632858_a_at:278:357; Interrogation_Position=2692; Antisense; GCACACCAAGGATCGAATGCGCGAG
>probe:Drosophila_2:1632858_a_at:235:73; Interrogation_Position=2733; Antisense; AGGAGAAGTTCAGACACCCACGTAC
>probe:Drosophila_2:1632858_a_at:207:353; Interrogation_Position=2820; Antisense; GCAGCATCAGTAGCCGCAGCAGTCG
>probe:Drosophila_2:1632858_a_at:469:359; Interrogation_Position=2847; Antisense; GCAACTCACTTGCTGTCTGAAACGT
>probe:Drosophila_2:1632858_a_at:415:477; Interrogation_Position=2880; Antisense; GTTTCGTTGTTAGTAGGAGTTCCAT

Paste this into a BLAST search page for me
GTTCCAGGCGCTCGAAGTCACGAAGTCCCACTACCGAAAGTCATCTTACTTTACTCATCGAGATCCAGGCGCAGCGCAAAACGCCGTCACAGCGCAAGAAGAATCGAAAGCTGGCGTCTACGCGCGGCCGACATCGTAGCAGTCGCAGTAGAAGCCGCAGCCATACGCCGAAAGAAAGAAGTCATCCTGGAGGCCGACAAAAGCTGGTGGCTTCTGCCGAGAAAAGCACACCAAGGATCGAATGCGCGAGAGGAGAAGTTCAGACACCCACGTACGCAGCATCAGTAGCCGCAGCAGTCGGCAACTCACTTGCTGTCTGAAACGTGTTTCGTTGTTAGTAGGAGTTCCAT

Full Affymetrix probeset data:

Annotations for 1632858_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720