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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632877_a_at:

>probe:Drosophila_2:1632877_a_at:136:245; Interrogation_Position=1398; Antisense; AATTTTGTGGGCTGTTGCTACCAGA
>probe:Drosophila_2:1632877_a_at:637:63; Interrogation_Position=1462; Antisense; ATGGGTACCCGTTGAGCAGTGAACT
>probe:Drosophila_2:1632877_a_at:342:177; Interrogation_Position=1496; Antisense; AAACGAATGCCAACTCAGCTACGAG
>probe:Drosophila_2:1632877_a_at:311:513; Interrogation_Position=1525; Antisense; GTGAGATCTCCTGTCACGCTATGGA
>probe:Drosophila_2:1632877_a_at:625:679; Interrogation_Position=1630; Antisense; TAGTGCATCAGTTTCCAGAGCTTCG
>probe:Drosophila_2:1632877_a_at:370:313; Interrogation_Position=1654; Antisense; GCCACTGTGCCCTGCGAAATGTAAA
>probe:Drosophila_2:1632877_a_at:433:89; Interrogation_Position=1694; Antisense; CGTACAGGGTACTCGCTTTGAAGCA
>probe:Drosophila_2:1632877_a_at:547:377; Interrogation_Position=1713; Antisense; GAAGCACTGGACAGCCGAACTCTAA
>probe:Drosophila_2:1632877_a_at:131:579; Interrogation_Position=1763; Antisense; GGCCAACTGGCAACGGATAGTCTCA
>probe:Drosophila_2:1632877_a_at:538:455; Interrogation_Position=1778; Antisense; GATAGTCTCATTCTACACACTTCGA
>probe:Drosophila_2:1632877_a_at:197:147; Interrogation_Position=1796; Antisense; ACTTCGATTAATGATGGCTCCGCTG
>probe:Drosophila_2:1632877_a_at:411:273; Interrogation_Position=1829; Antisense; CATTATTCTTTACGATCGCTGCCTG
>probe:Drosophila_2:1632877_a_at:98:451; Interrogation_Position=1842; Antisense; GATCGCTGCCTGTTTCTAATGGAAA
>probe:Drosophila_2:1632877_a_at:5:679; Interrogation_Position=1943; Antisense; TAGAGGCCATATTCGATCCTCGGCT

Paste this into a BLAST search page for me
AATTTTGTGGGCTGTTGCTACCAGAATGGGTACCCGTTGAGCAGTGAACTAAACGAATGCCAACTCAGCTACGAGGTGAGATCTCCTGTCACGCTATGGATAGTGCATCAGTTTCCAGAGCTTCGGCCACTGTGCCCTGCGAAATGTAAACGTACAGGGTACTCGCTTTGAAGCAGAAGCACTGGACAGCCGAACTCTAAGGCCAACTGGCAACGGATAGTCTCAGATAGTCTCATTCTACACACTTCGAACTTCGATTAATGATGGCTCCGCTGCATTATTCTTTACGATCGCTGCCTGGATCGCTGCCTGTTTCTAATGGAAATAGAGGCCATATTCGATCCTCGGCT

Full Affymetrix probeset data:

Annotations for 1632877_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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