FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632891_s_at:

>probe:Drosophila_2:1632891_s_at:391:493; Interrogation_Position=1758; Antisense; GTAAGCTAAAGCGTCGTCTGTTCGT
>probe:Drosophila_2:1632891_s_at:166:329; Interrogation_Position=1768; Antisense; GCGTCGTCTGTTCGTTTTTATTTCA
>probe:Drosophila_2:1632891_s_at:588:673; Interrogation_Position=1877; Antisense; TAGCGACAAGTCAGATTCATAGATA
>probe:Drosophila_2:1632891_s_at:394:153; Interrogation_Position=1903; Antisense; ACATGTATGTTCTATAGCAGCGAGT
>probe:Drosophila_2:1632891_s_at:382:113; Interrogation_Position=1951; Antisense; AGCACTCTCACCCATTTAGACAAGA
>probe:Drosophila_2:1632891_s_at:656:189; Interrogation_Position=1977; Antisense; AACATTATTTCTTTCATGCGCCTCA
>probe:Drosophila_2:1632891_s_at:37:697; Interrogation_Position=1988; Antisense; TTTCATGCGCCTCATAAACACCACA
>probe:Drosophila_2:1632891_s_at:122:157; Interrogation_Position=2010; Antisense; ACACTCAACAAGCATTCTCCTGTAC
>probe:Drosophila_2:1632891_s_at:46:203; Interrogation_Position=2059; Antisense; AACCAGCCAGGATCAACTAACAAGA
>probe:Drosophila_2:1632891_s_at:167:659; Interrogation_Position=2076; Antisense; TAACAAGATCTTCCCAACCAACTAA
>probe:Drosophila_2:1632891_s_at:456:253; Interrogation_Position=2094; Antisense; CAACTAAAACCCGTAGACACTTATG
>probe:Drosophila_2:1632891_s_at:225:399; Interrogation_Position=2109; Antisense; GACACTTATGATACATGGCATTAAC
>probe:Drosophila_2:1632891_s_at:488:363; Interrogation_Position=2216; Antisense; GAATAGAGCGCGAAATACCAACACA
>probe:Drosophila_2:1632891_s_at:553:407; Interrogation_Position=2272; Antisense; GAGTAAACAAGTAAAGATCCCCATT

Paste this into a BLAST search page for me
GTAAGCTAAAGCGTCGTCTGTTCGTGCGTCGTCTGTTCGTTTTTATTTCATAGCGACAAGTCAGATTCATAGATAACATGTATGTTCTATAGCAGCGAGTAGCACTCTCACCCATTTAGACAAGAAACATTATTTCTTTCATGCGCCTCATTTCATGCGCCTCATAAACACCACAACACTCAACAAGCATTCTCCTGTACAACCAGCCAGGATCAACTAACAAGATAACAAGATCTTCCCAACCAACTAACAACTAAAACCCGTAGACACTTATGGACACTTATGATACATGGCATTAACGAATAGAGCGCGAAATACCAACACAGAGTAAACAAGTAAAGATCCCCATT

Full Affymetrix probeset data:

Annotations for 1632891_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720