Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632899_s_at:

>probe:Drosophila_2:1632899_s_at:431:165; Interrogation_Position=3128; Antisense; AAATCTCCAGTTGCCAGTTAGCAGC
>probe:Drosophila_2:1632899_s_at:324:615; Interrogation_Position=3156; Antisense; TGAATTGGGCTGACCGATACCTAAT
>probe:Drosophila_2:1632899_s_at:9:183; Interrogation_Position=3194; Antisense; AAAACCAGATTCTTGCCCATTTCCA
>probe:Drosophila_2:1632899_s_at:209:693; Interrogation_Position=3248; Antisense; TTTGCTGGCCCAAAAATGCCGTGCG
>probe:Drosophila_2:1632899_s_at:514:233; Interrogation_Position=3262; Antisense; AATGCCGTGCGAACAGCTGCTGCAA
>probe:Drosophila_2:1632899_s_at:200:359; Interrogation_Position=3297; Antisense; GCAACTGCAGATCCAACTAAGCCGA
>probe:Drosophila_2:1632899_s_at:191:527; Interrogation_Position=3350; Antisense; GGGAATCTTTCATGTCAACCTCAAA
>probe:Drosophila_2:1632899_s_at:468:321; Interrogation_Position=3377; Antisense; GCCCAGCCTTCCAGGATAATTGGTT
>probe:Drosophila_2:1632899_s_at:359:717; Interrogation_Position=3425; Antisense; TTCGGATTGAGAGCTGGCCATCGAT
>probe:Drosophila_2:1632899_s_at:408:385; Interrogation_Position=3471; Antisense; GAAAATCTTTTTTGGAATGCCGGCA
>probe:Drosophila_2:1632899_s_at:78:395; Interrogation_Position=3529; Antisense; GAAATCTAAACCATCCACACACGGA
>probe:Drosophila_2:1632899_s_at:176:151; Interrogation_Position=3584; Antisense; ACATTTGCGGTTTACTGCATTGCTA
>probe:Drosophila_2:1632899_s_at:373:619; Interrogation_Position=3599; Antisense; TGCATTGCTATTTCCATCCACACAT
>probe:Drosophila_2:1632899_s_at:304:153; Interrogation_Position=3620; Antisense; ACATGCACAGCGGTGGTCACGAAAA

Paste this into a BLAST search page for me
AAATCTCCAGTTGCCAGTTAGCAGCTGAATTGGGCTGACCGATACCTAATAAAACCAGATTCTTGCCCATTTCCATTTGCTGGCCCAAAAATGCCGTGCGAATGCCGTGCGAACAGCTGCTGCAAGCAACTGCAGATCCAACTAAGCCGAGGGAATCTTTCATGTCAACCTCAAAGCCCAGCCTTCCAGGATAATTGGTTTTCGGATTGAGAGCTGGCCATCGATGAAAATCTTTTTTGGAATGCCGGCAGAAATCTAAACCATCCACACACGGAACATTTGCGGTTTACTGCATTGCTATGCATTGCTATTTCCATCCACACATACATGCACAGCGGTGGTCACGAAAA

Full Affymetrix probeset data:

Annotations for 1632899_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime