FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632908_s_at:

>probe:Drosophila_2:1632908_s_at:311:195; Interrogation_Position=3015; Antisense; AACTGGAACTGATTGTGAGCTAAAC
>probe:Drosophila_2:1632908_s_at:611:523; Interrogation_Position=3092; Antisense; GGGCGAACTGCTGATATAAACTGTA
>probe:Drosophila_2:1632908_s_at:300:483; Interrogation_Position=3125; Antisense; GTAGGCTACAACGACGACTTACGAA
>probe:Drosophila_2:1632908_s_at:160:131; Interrogation_Position=3225; Antisense; ACCTAACCCGTACCTATAGCTATAG
>probe:Drosophila_2:1632908_s_at:53:677; Interrogation_Position=3241; Antisense; TAGCTATAGTTAAATGCGGCCTGCA
>probe:Drosophila_2:1632908_s_at:446:331; Interrogation_Position=3256; Antisense; GCGGCCTGCATTCGCCAGAGAATTG
>probe:Drosophila_2:1632908_s_at:463:663; Interrogation_Position=3296; Antisense; TAAATCGTATTTTCGCTGACGCCAA
>probe:Drosophila_2:1632908_s_at:422:695; Interrogation_Position=3306; Antisense; TTTCGCTGACGCCAAAATGTATAAC
>probe:Drosophila_2:1632908_s_at:132:483; Interrogation_Position=3324; Antisense; GTATAACCAGTATAGCGCAGCAGCT
>probe:Drosophila_2:1632908_s_at:717:351; Interrogation_Position=3340; Antisense; GCAGCAGCTTTTTCCTTCCATAAAA
>probe:Drosophila_2:1632908_s_at:640:509; Interrogation_Position=3393; Antisense; GTGCAGCTTGTTAGTGGTATTCCTT
>probe:Drosophila_2:1632908_s_at:444:601; Interrogation_Position=3428; Antisense; TGTATTTTACTCTAAGGCAATCTGT
>probe:Drosophila_2:1632908_s_at:288:699; Interrogation_Position=3484; Antisense; TTTAGTTCAATAAGGCGAGCCACAC
>probe:Drosophila_2:1632908_s_at:25:173; Interrogation_Position=3512; Antisense; AAACGGCTGAGTGTACAATTTTAAG

Paste this into a BLAST search page for me
AACTGGAACTGATTGTGAGCTAAACGGGCGAACTGCTGATATAAACTGTAGTAGGCTACAACGACGACTTACGAAACCTAACCCGTACCTATAGCTATAGTAGCTATAGTTAAATGCGGCCTGCAGCGGCCTGCATTCGCCAGAGAATTGTAAATCGTATTTTCGCTGACGCCAATTTCGCTGACGCCAAAATGTATAACGTATAACCAGTATAGCGCAGCAGCTGCAGCAGCTTTTTCCTTCCATAAAAGTGCAGCTTGTTAGTGGTATTCCTTTGTATTTTACTCTAAGGCAATCTGTTTTAGTTCAATAAGGCGAGCCACACAAACGGCTGAGTGTACAATTTTAAG

Full Affymetrix probeset data:

Annotations for 1632908_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720