FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633026_a_at:

>probe:Drosophila_2:1633026_a_at:437:19; Interrogation_Position=4624; Antisense; ATTTGCTCCGCCAAAGATTCTGCTG
>probe:Drosophila_2:1633026_a_at:512:171; Interrogation_Position=4636; Antisense; AAAGATTCTGCTGGACGGCTGTTTA
>probe:Drosophila_2:1633026_a_at:94:389; Interrogation_Position=4672; Antisense; GAAAACTGCTTATACACATAGACTT
>probe:Drosophila_2:1633026_a_at:376:149; Interrogation_Position=4722; Antisense; ACTTACATCATTACCTATGCTATCA
>probe:Drosophila_2:1633026_a_at:515:387; Interrogation_Position=4779; Antisense; GAACAATATCTCTACACAACCACAA
>probe:Drosophila_2:1633026_a_at:585:439; Interrogation_Position=4804; Antisense; GATGGAGAACATCGGCAGTAACAAT
>probe:Drosophila_2:1633026_a_at:717:437; Interrogation_Position=4849; Antisense; GAGGACAAGCGCATTAGCATTAAGC
>probe:Drosophila_2:1633026_a_at:611:341; Interrogation_Position=4872; Antisense; GCTTAAGCAATTACTACCATACCGT
>probe:Drosophila_2:1633026_a_at:257:673; Interrogation_Position=4886; Antisense; TACCATACCGTGTACAACTTGTTTT
>probe:Drosophila_2:1633026_a_at:137:255; Interrogation_Position=4900; Antisense; CAACTTGTTTTTGGTCTTTTGCGAT
>probe:Drosophila_2:1633026_a_at:336:537; Interrogation_Position=4912; Antisense; GGTCTTTTGCGATACATTATCACAT
>probe:Drosophila_2:1633026_a_at:372:515; Interrogation_Position=4943; Antisense; GTGTAGGAACAGTTACTCCAATATT
>probe:Drosophila_2:1633026_a_at:180:41; Interrogation_Position=5000; Antisense; ATCGGTTGATTACGCGACATGTCCA
>probe:Drosophila_2:1633026_a_at:239:401; Interrogation_Position=5015; Antisense; GACATGTCCATGTAGCTAGAATATG

Paste this into a BLAST search page for me
ATTTGCTCCGCCAAAGATTCTGCTGAAAGATTCTGCTGGACGGCTGTTTAGAAAACTGCTTATACACATAGACTTACTTACATCATTACCTATGCTATCAGAACAATATCTCTACACAACCACAAGATGGAGAACATCGGCAGTAACAATGAGGACAAGCGCATTAGCATTAAGCGCTTAAGCAATTACTACCATACCGTTACCATACCGTGTACAACTTGTTTTCAACTTGTTTTTGGTCTTTTGCGATGGTCTTTTGCGATACATTATCACATGTGTAGGAACAGTTACTCCAATATTATCGGTTGATTACGCGACATGTCCAGACATGTCCATGTAGCTAGAATATG

Full Affymetrix probeset data:

Annotations for 1633026_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720