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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633204_a_at:

>probe:Drosophila_2:1633204_a_at:685:147; Interrogation_Position=3502; Antisense; ACTTTCTAAGCTAACGCCATCACAG
>probe:Drosophila_2:1633204_a_at:669:145; Interrogation_Position=3562; Antisense; ACTCGAAATCGAACAAGCTCTCCAA
>probe:Drosophila_2:1633204_a_at:157:207; Interrogation_Position=3576; Antisense; AAGCTCTCCAAATGCAACGACTAAA
>probe:Drosophila_2:1633204_a_at:59:193; Interrogation_Position=3600; Antisense; AACTCTCATCGTTTCGTAAGGAGCA
>probe:Drosophila_2:1633204_a_at:145:277; Interrogation_Position=3685; Antisense; CTTTTTTGTATTAATGCCCGTCATG
>probe:Drosophila_2:1633204_a_at:163:645; Interrogation_Position=3722; Antisense; TCTACACAATATTTACACTGCGGTC
>probe:Drosophila_2:1633204_a_at:107:259; Interrogation_Position=3737; Antisense; CACTGCGGTCATTTTATCCTACAAT
>probe:Drosophila_2:1633204_a_at:712:37; Interrogation_Position=3773; Antisense; ATCTGTTTATAGTATTCCGTGTCGA
>probe:Drosophila_2:1633204_a_at:408:689; Interrogation_Position=3785; Antisense; TATTCCGTGTCGATCGCTTTTTGAT
>probe:Drosophila_2:1633204_a_at:360:155; Interrogation_Position=3824; Antisense; ACACCATAGTATGTGGGTTCATTAT
>probe:Drosophila_2:1633204_a_at:84:705; Interrogation_Position=3940; Antisense; TTGTTTATTATCACGAACCGACCTA
>probe:Drosophila_2:1633204_a_at:275:259; Interrogation_Position=3951; Antisense; CACGAACCGACCTATTGCATTTTAT
>probe:Drosophila_2:1633204_a_at:510:141; Interrogation_Position=3979; Antisense; ACGGCATGTTCACGTTCATCAAAGA
>probe:Drosophila_2:1633204_a_at:165:209; Interrogation_Position=4000; Antisense; AAGACACTTTTAGCGTAGTTTATCT

Paste this into a BLAST search page for me
ACTTTCTAAGCTAACGCCATCACAGACTCGAAATCGAACAAGCTCTCCAAAAGCTCTCCAAATGCAACGACTAAAAACTCTCATCGTTTCGTAAGGAGCACTTTTTTGTATTAATGCCCGTCATGTCTACACAATATTTACACTGCGGTCCACTGCGGTCATTTTATCCTACAATATCTGTTTATAGTATTCCGTGTCGATATTCCGTGTCGATCGCTTTTTGATACACCATAGTATGTGGGTTCATTATTTGTTTATTATCACGAACCGACCTACACGAACCGACCTATTGCATTTTATACGGCATGTTCACGTTCATCAAAGAAAGACACTTTTAGCGTAGTTTATCT

Full Affymetrix probeset data:

Annotations for 1633204_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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