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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633242_a_at:

>probe:Drosophila_2:1633242_a_at:367:39; Interrogation_Position=2843; Antisense; ATCTGCGCTATGTCGAGAATGCCCG
>probe:Drosophila_2:1633242_a_at:50:369; Interrogation_Position=2859; Antisense; GAATGCCCGGTACTATAATCGCCTG
>probe:Drosophila_2:1633242_a_at:122:395; Interrogation_Position=2920; Antisense; GAAATGGGCATTGCCTTGCTGTCGC
>probe:Drosophila_2:1633242_a_at:121:599; Interrogation_Position=2939; Antisense; TGTCGCGCTATTGCCGGGACAAATA
>probe:Drosophila_2:1633242_a_at:667:671; Interrogation_Position=2962; Antisense; TACCATTTACAGGTGTCGGACGCCG
>probe:Drosophila_2:1633242_a_at:63:231; Interrogation_Position=3004; Antisense; AATGTTGCACTTACCGAGATCGATA
>probe:Drosophila_2:1633242_a_at:454:427; Interrogation_Position=3019; Antisense; GAGATCGATATGCTGCACGTGCGAA
>probe:Drosophila_2:1633242_a_at:601:57; Interrogation_Position=3047; Antisense; ATGAGGTCTTGGACGGTGCCACCAC
>probe:Drosophila_2:1633242_a_at:514:29; Interrogation_Position=3079; Antisense; ATACTTAAGCCCGTTGTCCAGGAGG
>probe:Drosophila_2:1633242_a_at:529:543; Interrogation_Position=3126; Antisense; GGATGCCTGCATCGAGATCAAGTCC
>probe:Drosophila_2:1633242_a_at:122:47; Interrogation_Position=3250; Antisense; ATCCCGTGCAGATGTGCTCCGGAAT
>probe:Drosophila_2:1633242_a_at:457:149; Interrogation_Position=3300; Antisense; ACTTCGATCGTCTTTGGTGGCAATA
>probe:Drosophila_2:1633242_a_at:513:123; Interrogation_Position=3324; Antisense; AGCCTGTTTTGGCATCCAGCTAGAA
>probe:Drosophila_2:1633242_a_at:644:3; Interrogation_Position=3349; Antisense; ATTGGATCACACGTCATTTCAGTAA

Paste this into a BLAST search page for me
ATCTGCGCTATGTCGAGAATGCCCGGAATGCCCGGTACTATAATCGCCTGGAAATGGGCATTGCCTTGCTGTCGCTGTCGCGCTATTGCCGGGACAAATATACCATTTACAGGTGTCGGACGCCGAATGTTGCACTTACCGAGATCGATAGAGATCGATATGCTGCACGTGCGAAATGAGGTCTTGGACGGTGCCACCACATACTTAAGCCCGTTGTCCAGGAGGGGATGCCTGCATCGAGATCAAGTCCATCCCGTGCAGATGTGCTCCGGAATACTTCGATCGTCTTTGGTGGCAATAAGCCTGTTTTGGCATCCAGCTAGAAATTGGATCACACGTCATTTCAGTAA

Full Affymetrix probeset data:

Annotations for 1633242_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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