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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633295_a_at:

>probe:Drosophila_2:1633295_a_at:231:695; Interrogation_Position=1002; Antisense; TTTCCGGTATTATGGGCGTAGCTTG
>probe:Drosophila_2:1633295_a_at:427:483; Interrogation_Position=1116; Antisense; GTATCATTTTATTTGTCCTGCTTAT
>probe:Drosophila_2:1633295_a_at:385:689; Interrogation_Position=1138; Antisense; TATTTTTAAGCGCAGCACCCATCAA
>probe:Drosophila_2:1633295_a_at:531:541; Interrogation_Position=632; Antisense; GGTTCTCCATAATCAGCTATTGCAT
>probe:Drosophila_2:1633295_a_at:374:165; Interrogation_Position=665; Antisense; AAATCACATCTGTCGTTAGCCAAGA
>probe:Drosophila_2:1633295_a_at:438:327; Interrogation_Position=695; Antisense; GCGATCAGTTCGTCTTTTACAGTAC
>probe:Drosophila_2:1633295_a_at:589:489; Interrogation_Position=716; Antisense; GTACTTTTGCCTACGGGATATCTGC
>probe:Drosophila_2:1633295_a_at:532:543; Interrogation_Position=731; Antisense; GGATATCTGCTATACCACTCGGAAT
>probe:Drosophila_2:1633295_a_at:268:143; Interrogation_Position=803; Antisense; ACTGGTTGCCCTTAGTTGATTGTAA
>probe:Drosophila_2:1633295_a_at:587:657; Interrogation_Position=825; Antisense; TAAGCGGTCTTCCTGGGTTTATTAT
>probe:Drosophila_2:1633295_a_at:308:539; Interrogation_Position=840; Antisense; GGTTTATTATTTTGTGCCCTATGCG
>probe:Drosophila_2:1633295_a_at:170:625; Interrogation_Position=854; Antisense; TGCCCTATGCGATCATGTGTGCCAT
>probe:Drosophila_2:1633295_a_at:601:137; Interrogation_Position=965; Antisense; ACGAGACTTGTGTTACTGTACCTAT
>probe:Drosophila_2:1633295_a_at:542:487; Interrogation_Position=982; Antisense; GTACCTATTGTTTCTGCGGATTTCC

Paste this into a BLAST search page for me
TTTCCGGTATTATGGGCGTAGCTTGGTATCATTTTATTTGTCCTGCTTATTATTTTTAAGCGCAGCACCCATCAAGGTTCTCCATAATCAGCTATTGCATAAATCACATCTGTCGTTAGCCAAGAGCGATCAGTTCGTCTTTTACAGTACGTACTTTTGCCTACGGGATATCTGCGGATATCTGCTATACCACTCGGAATACTGGTTGCCCTTAGTTGATTGTAATAAGCGGTCTTCCTGGGTTTATTATGGTTTATTATTTTGTGCCCTATGCGTGCCCTATGCGATCATGTGTGCCATACGAGACTTGTGTTACTGTACCTATGTACCTATTGTTTCTGCGGATTTCC

Full Affymetrix probeset data:

Annotations for 1633295_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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