FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633341_s_at:

>probe:Drosophila_2:1633341_s_at:530:137; Interrogation_Position=4393; Antisense; ACGATGTAGTTTTTCTAATGCTAAG
>probe:Drosophila_2:1633341_s_at:318:709; Interrogation_Position=4429; Antisense; TTAACTAGCCTAGCAGGAGTGCAGT
>probe:Drosophila_2:1633341_s_at:380:349; Interrogation_Position=4441; Antisense; GCAGGAGTGCAGTAAGTTCGTAATA
>probe:Drosophila_2:1633341_s_at:401:215; Interrogation_Position=4498; Antisense; AAGTATTTCACTTGCCTAGGCGATA
>probe:Drosophila_2:1633341_s_at:591:179; Interrogation_Position=4586; Antisense; AAACAAACTTGTATGCCCGTTGCAA
>probe:Drosophila_2:1633341_s_at:699:273; Interrogation_Position=4593; Antisense; CTTGTATGCCCGTTGCAAAAGCAAA
>probe:Drosophila_2:1633341_s_at:58:147; Interrogation_Position=4665; Antisense; ACTATTTAAACGCTTCATATGCTAT
>probe:Drosophila_2:1633341_s_at:400:653; Interrogation_Position=4753; Antisense; TAATTCCGCGAATCAGCAAACAACA
>probe:Drosophila_2:1633341_s_at:71:657; Interrogation_Position=4779; Antisense; TAACGGTTCAAATATTGTGCAACAT
>probe:Drosophila_2:1633341_s_at:502:189; Interrogation_Position=4799; Antisense; AACATTTCGCCGCTCGCAGTGAAAA
>probe:Drosophila_2:1633341_s_at:203:719; Interrogation_Position=4804; Antisense; TTCGCCGCTCGCAGTGAAAACACAG
>probe:Drosophila_2:1633341_s_at:494:241; Interrogation_Position=4857; Antisense; AATACAGCAGCCGACAACCGACAGA
>probe:Drosophila_2:1633341_s_at:284:201; Interrogation_Position=4872; Antisense; AACCGACAGACAAAACCAACACCAG
>probe:Drosophila_2:1633341_s_at:650:261; Interrogation_Position=4891; Antisense; CACCAGCAACCAAGCGAAAAAGTTT

Paste this into a BLAST search page for me
ACGATGTAGTTTTTCTAATGCTAAGTTAACTAGCCTAGCAGGAGTGCAGTGCAGGAGTGCAGTAAGTTCGTAATAAAGTATTTCACTTGCCTAGGCGATAAAACAAACTTGTATGCCCGTTGCAACTTGTATGCCCGTTGCAAAAGCAAAACTATTTAAACGCTTCATATGCTATTAATTCCGCGAATCAGCAAACAACATAACGGTTCAAATATTGTGCAACATAACATTTCGCCGCTCGCAGTGAAAATTCGCCGCTCGCAGTGAAAACACAGAATACAGCAGCCGACAACCGACAGAAACCGACAGACAAAACCAACACCAGCACCAGCAACCAAGCGAAAAAGTTT

Full Affymetrix probeset data:

Annotations for 1633341_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720