FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633513_a_at:

>probe:Drosophila_2:1633513_a_at:499:441; Interrogation_Position=1013; Antisense; GATGGAGCACGACTTCCACTGGGCA
>probe:Drosophila_2:1633513_a_at:355:143; Interrogation_Position=1030; Antisense; ACTGGGCACTTCAATTTCTGGCCGA
>probe:Drosophila_2:1633513_a_at:664:413; Interrogation_Position=1053; Antisense; GACCATCCGGATCCTGTGCTGAGTG
>probe:Drosophila_2:1633513_a_at:158:263; Interrogation_Position=1095; Antisense; CAGCGTTTGACGACCGAGGGCAAGT
>probe:Drosophila_2:1633513_a_at:665:433; Interrogation_Position=1110; Antisense; GAGGGCAAGTTCGAGCTTTCGCCAC
>probe:Drosophila_2:1633513_a_at:459:695; Interrogation_Position=1126; Antisense; TTTCGCCACTGGAACACTTTTGGAC
>probe:Drosophila_2:1633513_a_at:668:723; Interrogation_Position=1145; Antisense; TTGGACGAGTCCCTACGAGTTCTAT
>probe:Drosophila_2:1633513_a_at:57:295; Interrogation_Position=1160; Antisense; CGAGTTCTATCGCATGCCAGAGGTA
>probe:Drosophila_2:1633513_a_at:151:99; Interrogation_Position=1178; Antisense; AGAGGTAAATCCCTCACTCTACGAC
>probe:Drosophila_2:1633513_a_at:558:77; Interrogation_Position=1210; Antisense; AGGAGGCGCAACTGGTTATCTTCAA
>probe:Drosophila_2:1633513_a_at:187:705; Interrogation_Position=1260; Antisense; TTAGGCGACTTCTCCTGGGACAGCA
>probe:Drosophila_2:1633513_a_at:31:141; Interrogation_Position=1284; Antisense; ACGGAGTCCTTCGAAACTTGCTTGA
>probe:Drosophila_2:1633513_a_at:518:37; Interrogation_Position=1327; Antisense; ATCTCTGCACTCTGCGCACAATTAA
>probe:Drosophila_2:1633513_a_at:371:265; Interrogation_Position=1546; Antisense; CAGAGTGACCTATGCGAGATCCAAA

Paste this into a BLAST search page for me
GATGGAGCACGACTTCCACTGGGCAACTGGGCACTTCAATTTCTGGCCGAGACCATCCGGATCCTGTGCTGAGTGCAGCGTTTGACGACCGAGGGCAAGTGAGGGCAAGTTCGAGCTTTCGCCACTTTCGCCACTGGAACACTTTTGGACTTGGACGAGTCCCTACGAGTTCTATCGAGTTCTATCGCATGCCAGAGGTAAGAGGTAAATCCCTCACTCTACGACAGGAGGCGCAACTGGTTATCTTCAATTAGGCGACTTCTCCTGGGACAGCAACGGAGTCCTTCGAAACTTGCTTGAATCTCTGCACTCTGCGCACAATTAACAGAGTGACCTATGCGAGATCCAAA

Full Affymetrix probeset data:

Annotations for 1633513_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720