Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633528_s_at:

>probe:Drosophila_2:1633528_s_at:359:707; Interrogation_Position=1793; Antisense; TTAAGAATATTTTTTGCCCGAACAT
>probe:Drosophila_2:1633528_s_at:430:115; Interrogation_Position=1873; Antisense; AGCATGTTGTTTGTGGCATGTCAAC
>probe:Drosophila_2:1633528_s_at:211:529; Interrogation_Position=1964; Antisense; GGGTTAATAACCAATGCAGTGACTT
>probe:Drosophila_2:1633528_s_at:366:85; Interrogation_Position=1981; Antisense; AGTGACTTTTTCTGCATAGCCCCAT
>probe:Drosophila_2:1633528_s_at:286:345; Interrogation_Position=1994; Antisense; GCATAGCCCCATTTAGCTTATATAT
>probe:Drosophila_2:1633528_s_at:548:699; Interrogation_Position=2073; Antisense; TTTTCACAACGAGTGGAGGAGGCAC
>probe:Drosophila_2:1633528_s_at:190:549; Interrogation_Position=2090; Antisense; GGAGGCACAAGTTTCAGAGCTATTA
>probe:Drosophila_2:1633528_s_at:404:277; Interrogation_Position=2109; Antisense; CTATTATTTTGACCGCAGCTGTGTA
>probe:Drosophila_2:1633528_s_at:272:413; Interrogation_Position=2119; Antisense; GACCGCAGCTGTGTATAAATATATT
>probe:Drosophila_2:1633528_s_at:80:655; Interrogation_Position=2145; Antisense; TAATACATTTACCTACATTTGCGGG
>probe:Drosophila_2:1633528_s_at:694:681; Interrogation_Position=2199; Antisense; TATGACGATTCTTTTTTGGCTACAG
>probe:Drosophila_2:1633528_s_at:659:689; Interrogation_Position=2213; Antisense; TTTGGCTACAGTACGTATACGACAG
>probe:Drosophila_2:1633528_s_at:10:31; Interrogation_Position=2346; Antisense; ATACATGTTGTTGTTATCCGCACAC
>probe:Drosophila_2:1633528_s_at:298:683; Interrogation_Position=2360; Antisense; TATCCGCACACACGTCAACTAATTA

Paste this into a BLAST search page for me
TTAAGAATATTTTTTGCCCGAACATAGCATGTTGTTTGTGGCATGTCAACGGGTTAATAACCAATGCAGTGACTTAGTGACTTTTTCTGCATAGCCCCATGCATAGCCCCATTTAGCTTATATATTTTTCACAACGAGTGGAGGAGGCACGGAGGCACAAGTTTCAGAGCTATTACTATTATTTTGACCGCAGCTGTGTAGACCGCAGCTGTGTATAAATATATTTAATACATTTACCTACATTTGCGGGTATGACGATTCTTTTTTGGCTACAGTTTGGCTACAGTACGTATACGACAGATACATGTTGTTGTTATCCGCACACTATCCGCACACACGTCAACTAATTA

Full Affymetrix probeset data:

Annotations for 1633528_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime