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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633534_s_at:

>probe:Drosophila_2:1633534_s_at:673:329; Interrogation_Position=3414; Antisense; GCGGTCACTCAAAACCCAGATGGTT
>probe:Drosophila_2:1633534_s_at:214:685; Interrogation_Position=3462; Antisense; TATTAATCCCCAGAGGGCTTTTCGG
>probe:Drosophila_2:1633534_s_at:55:697; Interrogation_Position=3481; Antisense; TTTCGGGACCTTTTGAGGCATCGGT
>probe:Drosophila_2:1633534_s_at:580:567; Interrogation_Position=3497; Antisense; GGCATCGGTGCCAAATCGAAATGGT
>probe:Drosophila_2:1633534_s_at:682:361; Interrogation_Position=3529; Antisense; GAATTGTTGCTGTCCACACGCATAG
>probe:Drosophila_2:1633534_s_at:620:259; Interrogation_Position=3545; Antisense; CACGCATAGCCATGCATAGCTCTAT
>probe:Drosophila_2:1633534_s_at:638:491; Interrogation_Position=3608; Antisense; GTAACTTGGATTTGTGTTTTCACGC
>probe:Drosophila_2:1633534_s_at:244:477; Interrogation_Position=3623; Antisense; GTTTTCACGCTTTTGAGTTAGGCTT
>probe:Drosophila_2:1633534_s_at:70:705; Interrogation_Position=3640; Antisense; TTAGGCTTGCGTATTTACTGCTTCC
>probe:Drosophila_2:1633534_s_at:392:669; Interrogation_Position=3655; Antisense; TACTGCTTCCTCTACGTATTTTGTA
>probe:Drosophila_2:1633534_s_at:690:17; Interrogation_Position=3723; Antisense; ATTTACCCATATACGACTTACACAA
>probe:Drosophila_2:1633534_s_at:517:5; Interrogation_Position=3785; Antisense; ATTGTACGAACTGAACCCACTGAAG
>probe:Drosophila_2:1633534_s_at:586:373; Interrogation_Position=3809; Antisense; GAAGTTCTTCTTCTTGCACTAGCAA
>probe:Drosophila_2:1633534_s_at:551:21; Interrogation_Position=3915; Antisense; ATATTTTGTTCGTTTCTACTGTTCG

Paste this into a BLAST search page for me
GCGGTCACTCAAAACCCAGATGGTTTATTAATCCCCAGAGGGCTTTTCGGTTTCGGGACCTTTTGAGGCATCGGTGGCATCGGTGCCAAATCGAAATGGTGAATTGTTGCTGTCCACACGCATAGCACGCATAGCCATGCATAGCTCTATGTAACTTGGATTTGTGTTTTCACGCGTTTTCACGCTTTTGAGTTAGGCTTTTAGGCTTGCGTATTTACTGCTTCCTACTGCTTCCTCTACGTATTTTGTAATTTACCCATATACGACTTACACAAATTGTACGAACTGAACCCACTGAAGGAAGTTCTTCTTCTTGCACTAGCAAATATTTTGTTCGTTTCTACTGTTCG

Full Affymetrix probeset data:

Annotations for 1633534_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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