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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633624_s_at:

>probe:Drosophila_2:1633624_s_at:325:101; Interrogation_Position=1968; Antisense; AGAGCGGATAGGTGTGCATCCCTCA
>probe:Drosophila_2:1633624_s_at:356:517; Interrogation_Position=1979; Antisense; GTGTGCATCCCTCAAAATCTTGCTT
>probe:Drosophila_2:1633624_s_at:597:37; Interrogation_Position=1995; Antisense; ATCTTGCTTATTTTCATACGCTCCC
>probe:Drosophila_2:1633624_s_at:225:337; Interrogation_Position=2014; Antisense; GCTCCCACTCGCATGTATAAATTTT
>probe:Drosophila_2:1633624_s_at:704:599; Interrogation_Position=2237; Antisense; TGTTGGTTGGTTAATGTCCTCTATT
>probe:Drosophila_2:1633624_s_at:441:265; Interrogation_Position=2285; Antisense; CAGTCCACAGGAAACCGAACATCAT
>probe:Drosophila_2:1633624_s_at:18:223; Interrogation_Position=2311; Antisense; AAGGTGTCTTATCTAGGATTTCAAC
>probe:Drosophila_2:1633624_s_at:262:543; Interrogation_Position=2326; Antisense; GGATTTCAACACCTGTATACAGTAA
>probe:Drosophila_2:1633624_s_at:437:423; Interrogation_Position=2356; Antisense; GAGAACGCTCTACCTGGCTAAACGG
>probe:Drosophila_2:1633624_s_at:263:677; Interrogation_Position=2410; Antisense; TAGAAATCCACGTATGCAAGTCGAT
>probe:Drosophila_2:1633624_s_at:385:361; Interrogation_Position=2425; Antisense; GCAAGTCGATGGATCCAGCTTTCCA
>probe:Drosophila_2:1633624_s_at:716:115; Interrogation_Position=2441; Antisense; AGCTTTCCATATCATTCTCCAATCA
>probe:Drosophila_2:1633624_s_at:165:643; Interrogation_Position=2456; Antisense; TCTCCAATCATCTAGGGTGTCCAAA
>probe:Drosophila_2:1633624_s_at:165:31; Interrogation_Position=2485; Antisense; ATAAAGTTTTTCTTTGCTGCATAGA

Paste this into a BLAST search page for me
AGAGCGGATAGGTGTGCATCCCTCAGTGTGCATCCCTCAAAATCTTGCTTATCTTGCTTATTTTCATACGCTCCCGCTCCCACTCGCATGTATAAATTTTTGTTGGTTGGTTAATGTCCTCTATTCAGTCCACAGGAAACCGAACATCATAAGGTGTCTTATCTAGGATTTCAACGGATTTCAACACCTGTATACAGTAAGAGAACGCTCTACCTGGCTAAACGGTAGAAATCCACGTATGCAAGTCGATGCAAGTCGATGGATCCAGCTTTCCAAGCTTTCCATATCATTCTCCAATCATCTCCAATCATCTAGGGTGTCCAAAATAAAGTTTTTCTTTGCTGCATAGA

Full Affymetrix probeset data:

Annotations for 1633624_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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