FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633711_a_at:

>probe:Drosophila_2:1633711_a_at:108:579; Interrogation_Position=1301; Antisense; GGCCGAGCAAGCTGTCAGCAGCAAT
>probe:Drosophila_2:1633711_a_at:285:361; Interrogation_Position=1321; Antisense; GCAATAGCAGCAGTATCACAACGAA
>probe:Drosophila_2:1633711_a_at:491:171; Interrogation_Position=1344; Antisense; AAAGTCCAATCTTCAGCGGTGACCT
>probe:Drosophila_2:1633711_a_at:113:513; Interrogation_Position=1362; Antisense; GTGACCTCCTCCATGTTTGTGGAGA
>probe:Drosophila_2:1633711_a_at:15:521; Interrogation_Position=1380; Antisense; GTGGAGAACTCAACGACCAGCAGCT
>probe:Drosophila_2:1633711_a_at:702:113; Interrogation_Position=1458; Antisense; AGCTTGTCGGCTGCCAAAGTCCAAA
>probe:Drosophila_2:1633711_a_at:207:313; Interrogation_Position=1509; Antisense; GCCACAAGGCCAAACAGTCTAGCTA
>probe:Drosophila_2:1633711_a_at:464:253; Interrogation_Position=1542; Antisense; CAACGAAGTGTTTCGCCTCTGGTAA
>probe:Drosophila_2:1633711_a_at:399:113; Interrogation_Position=1581; Antisense; AGCAGCTCGCAGTCCCAGGAGGAGA
>probe:Drosophila_2:1633711_a_at:238:281; Interrogation_Position=1620; Antisense; CTGAACAACCACCAGGATGCCAGTT
>probe:Drosophila_2:1633711_a_at:438:45; Interrogation_Position=1636; Antisense; ATGCCAGTTCCTCAAGGGTGGCCCA
>probe:Drosophila_2:1633711_a_at:163:531; Interrogation_Position=1694; Antisense; GGTGCTAAACCAACAGCGAACCATT
>probe:Drosophila_2:1633711_a_at:619:233; Interrogation_Position=1731; Antisense; AATGCCCTGAAATCGGAAGCTGAAC
>probe:Drosophila_2:1633711_a_at:211:379; Interrogation_Position=1746; Antisense; GAAGCTGAACGCGTCAAGATTTTGA

Paste this into a BLAST search page for me
GGCCGAGCAAGCTGTCAGCAGCAATGCAATAGCAGCAGTATCACAACGAAAAAGTCCAATCTTCAGCGGTGACCTGTGACCTCCTCCATGTTTGTGGAGAGTGGAGAACTCAACGACCAGCAGCTAGCTTGTCGGCTGCCAAAGTCCAAAGCCACAAGGCCAAACAGTCTAGCTACAACGAAGTGTTTCGCCTCTGGTAAAGCAGCTCGCAGTCCCAGGAGGAGACTGAACAACCACCAGGATGCCAGTTATGCCAGTTCCTCAAGGGTGGCCCAGGTGCTAAACCAACAGCGAACCATTAATGCCCTGAAATCGGAAGCTGAACGAAGCTGAACGCGTCAAGATTTTGA

Full Affymetrix probeset data:

Annotations for 1633711_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720