FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633729_a_at:

>probe:Drosophila_2:1633729_a_at:370:215; Interrogation_Position=3413; Antisense; AAGTTCGATGGCTTCGAGGCACACA
>probe:Drosophila_2:1633729_a_at:229:439; Interrogation_Position=3428; Antisense; GAGGCACACAACTTCTCGAGTGACT
>probe:Drosophila_2:1633729_a_at:440:433; Interrogation_Position=3445; Antisense; GAGTGACTTCGGAAACGCCTCCTTC
>probe:Drosophila_2:1633729_a_at:395:723; Interrogation_Position=3546; Antisense; TTGCTGCAGACTATTCCAAGCCGGA
>probe:Drosophila_2:1633729_a_at:180:615; Interrogation_Position=3600; Antisense; TGAAGCGCAGCGTACTGGACAACTA
>probe:Drosophila_2:1633729_a_at:424:83; Interrogation_Position=3677; Antisense; AGTGGCACATGCAATGGCTTCTCTA
>probe:Drosophila_2:1633729_a_at:277:355; Interrogation_Position=3705; Antisense; GCACCCAATCCGTTCTTTAGTGTTA
>probe:Drosophila_2:1633729_a_at:328:679; Interrogation_Position=3722; Antisense; TAGTGTTAGTGCTTTCTTTCCGCTT
>probe:Drosophila_2:1633729_a_at:211:629; Interrogation_Position=3740; Antisense; TCCGCTTCGATCAAGACATCCTGGA
>probe:Drosophila_2:1633729_a_at:240:47; Interrogation_Position=3757; Antisense; ATCCTGGAGGCACACACGTACATAT
>probe:Drosophila_2:1633729_a_at:285:589; Interrogation_Position=3792; Antisense; TGGTATTTACTCAGTACTCCTCGTG
>probe:Drosophila_2:1633729_a_at:658:637; Interrogation_Position=3812; Antisense; TCGTGCTCAAGGATCCGGGCGAATA
>probe:Drosophila_2:1633729_a_at:472:219; Interrogation_Position=3840; Antisense; AAGTCCAACAAAGCCGCAGCTGGTA
>probe:Drosophila_2:1633729_a_at:522:17; Interrogation_Position=3902; Antisense; ATTTCGCGTAACCACATACTCGTAG

Paste this into a BLAST search page for me
AAGTTCGATGGCTTCGAGGCACACAGAGGCACACAACTTCTCGAGTGACTGAGTGACTTCGGAAACGCCTCCTTCTTGCTGCAGACTATTCCAAGCCGGATGAAGCGCAGCGTACTGGACAACTAAGTGGCACATGCAATGGCTTCTCTAGCACCCAATCCGTTCTTTAGTGTTATAGTGTTAGTGCTTTCTTTCCGCTTTCCGCTTCGATCAAGACATCCTGGAATCCTGGAGGCACACACGTACATATTGGTATTTACTCAGTACTCCTCGTGTCGTGCTCAAGGATCCGGGCGAATAAAGTCCAACAAAGCCGCAGCTGGTAATTTCGCGTAACCACATACTCGTAG

Full Affymetrix probeset data:

Annotations for 1633729_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720