FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633735_a_at:

>probe:Drosophila_2:1633735_a_at:725:23; Interrogation_Position=636; Antisense; ATACCGGATGAGGAAGTGTCGCGAC
>probe:Drosophila_2:1633735_a_at:660:219; Interrogation_Position=649; Antisense; AAGTGTCGCGACTTTTCCGAGCCGA
>probe:Drosophila_2:1633735_a_at:645:289; Interrogation_Position=679; Antisense; CGGACACCCAGAAACGCATTCTTAA
>probe:Drosophila_2:1633735_a_at:719:273; Interrogation_Position=695; Antisense; CATTCTTAACAACTTTGCGCGCGAT
>probe:Drosophila_2:1633735_a_at:299:625; Interrogation_Position=710; Antisense; TGCGCGCGATTTGCCAGTAACGAAT
>probe:Drosophila_2:1633735_a_at:492:159; Interrogation_Position=738; Antisense; ACAATGAATGGTTCGGTGCGGTTCT
>probe:Drosophila_2:1633735_a_at:646:95; Interrogation_Position=775; Antisense; AGATCATCAAGCCAGACCGAGCTCA
>probe:Drosophila_2:1633735_a_at:260:413; Interrogation_Position=789; Antisense; GACCGAGCTCACCACTGTAGTGTGT
>probe:Drosophila_2:1633735_a_at:139:621; Interrogation_Position=819; Antisense; TGCTGCGTACTGAAGATGGATCACC
>probe:Drosophila_2:1633735_a_at:384:625; Interrogation_Position=846; Antisense; TGCCCCTGGGTAAACAACTGCGTTA
>probe:Drosophila_2:1633735_a_at:453:217; Interrogation_Position=885; Antisense; AAGTACTTCGTGTTGTTCCTGGGCT
>probe:Drosophila_2:1633735_a_at:724:681; Interrogation_Position=909; Antisense; TATGCTCTTGTCTACTGCCTGTATG
>probe:Drosophila_2:1633735_a_at:630:599; Interrogation_Position=928; Antisense; TGTATGTGGCTTTTACCTCGCTACA
>probe:Drosophila_2:1633735_a_at:212:261; Interrogation_Position=951; Antisense; CACGACTTTGTCGAGTTCTGGAAGG

Paste this into a BLAST search page for me
ATACCGGATGAGGAAGTGTCGCGACAAGTGTCGCGACTTTTCCGAGCCGACGGACACCCAGAAACGCATTCTTAACATTCTTAACAACTTTGCGCGCGATTGCGCGCGATTTGCCAGTAACGAATACAATGAATGGTTCGGTGCGGTTCTAGATCATCAAGCCAGACCGAGCTCAGACCGAGCTCACCACTGTAGTGTGTTGCTGCGTACTGAAGATGGATCACCTGCCCCTGGGTAAACAACTGCGTTAAAGTACTTCGTGTTGTTCCTGGGCTTATGCTCTTGTCTACTGCCTGTATGTGTATGTGGCTTTTACCTCGCTACACACGACTTTGTCGAGTTCTGGAAGG

Full Affymetrix probeset data:

Annotations for 1633735_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720