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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633746_s_at:

>probe:Drosophila_2:1633746_s_at:497:413; Interrogation_Position=4252; Antisense; GACCTGGACTGAAATCGTTGGGCTT
>probe:Drosophila_2:1633746_s_at:558:679; Interrogation_Position=4282; Antisense; TAGTGGGAGGTCGAGATTCGCCAAA
>probe:Drosophila_2:1633746_s_at:605:677; Interrogation_Position=4323; Antisense; TTTGTAAAGACCGTGTTTCCCTCAG
>probe:Drosophila_2:1633746_s_at:600:313; Interrogation_Position=4348; Antisense; GCCAGGCAGCCGATGATGGCACACT
>probe:Drosophila_2:1633746_s_at:664:67; Interrogation_Position=4363; Antisense; ATGGCACACTGCAAGCGGGCGACGA
>probe:Drosophila_2:1633746_s_at:106:179; Interrogation_Position=4406; Antisense; AAACTCTGTGCAGGGCATGAGTCAT
>probe:Drosophila_2:1633746_s_at:88:49; Interrogation_Position=4429; Antisense; ATGCCGAAACCATAGGACTCTTTAA
>probe:Drosophila_2:1633746_s_at:566:663; Interrogation_Position=4511; Antisense; TAAATCGATGGGTTGCTAGTGCTAG
>probe:Drosophila_2:1633746_s_at:282:341; Interrogation_Position=4525; Antisense; GCTAGTGCTAGTTAATGCCCGTATT
>probe:Drosophila_2:1633746_s_at:564:233; Interrogation_Position=4538; Antisense; AATGCCCGTATTTGACTTATTCCCA
>probe:Drosophila_2:1633746_s_at:296:679; Interrogation_Position=4577; Antisense; TATGGACAACCTGCATCGTTTAACC
>probe:Drosophila_2:1633746_s_at:415:507; Interrogation_Position=4629; Antisense; GTGAAGCCTTTTTTGTAATCGTACA
>probe:Drosophila_2:1633746_s_at:69:493; Interrogation_Position=4643; Antisense; GTAATCGTACAAAGCCCCTTGCAAG
>probe:Drosophila_2:1633746_s_at:368:687; Interrogation_Position=4751; Antisense; TATTTACCCATTCTAGACTAGGCTA

Paste this into a BLAST search page for me
GACCTGGACTGAAATCGTTGGGCTTTAGTGGGAGGTCGAGATTCGCCAAATTTGTAAAGACCGTGTTTCCCTCAGGCCAGGCAGCCGATGATGGCACACTATGGCACACTGCAAGCGGGCGACGAAAACTCTGTGCAGGGCATGAGTCATATGCCGAAACCATAGGACTCTTTAATAAATCGATGGGTTGCTAGTGCTAGGCTAGTGCTAGTTAATGCCCGTATTAATGCCCGTATTTGACTTATTCCCATATGGACAACCTGCATCGTTTAACCGTGAAGCCTTTTTTGTAATCGTACAGTAATCGTACAAAGCCCCTTGCAAGTATTTACCCATTCTAGACTAGGCTA

Full Affymetrix probeset data:

Annotations for 1633746_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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