Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633771_s_at:

>probe:Drosophila_2:1633771_s_at:69:135; Interrogation_Position=1728; Antisense; ACGCTACGAAGTGGCATGGTTCTTT
>probe:Drosophila_2:1633771_s_at:648:241; Interrogation_Position=1767; Antisense; AATAGTCTGGATGAGCCCTACGGGA
>probe:Drosophila_2:1633771_s_at:480:203; Interrogation_Position=1804; Antisense; AAGCCAAGGTGTCCGTGCTGTTCCA
>probe:Drosophila_2:1633771_s_at:446:37; Interrogation_Position=1839; Antisense; ATCTATGTCGGCTTCCAAACCACAG
>probe:Drosophila_2:1633771_s_at:1:175; Interrogation_Position=1855; Antisense; AAACCACAGTCCACATAGGCAGCAT
>probe:Drosophila_2:1633771_s_at:47:289; Interrogation_Position=1913; Antisense; CGGCGAGCGACTGGGCACAAACGAT
>probe:Drosophila_2:1633771_s_at:553:533; Interrogation_Position=1946; Antisense; GGTGATGTTCGAGTTCGTCGGCCAC
>probe:Drosophila_2:1633771_s_at:214:91; Interrogation_Position=1975; Antisense; AGTACGTGCGTCCTGGAATGCGCAT
>probe:Drosophila_2:1633771_s_at:602:367; Interrogation_Position=1990; Antisense; GAATGCGCATCCTGTTCCGCGAGGG
>probe:Drosophila_2:1633771_s_at:224:367; Interrogation_Position=2026; Antisense; GAATCGGAGTTGTCACGCAGGTGTT
>probe:Drosophila_2:1633771_s_at:378:515; Interrogation_Position=2046; Antisense; GTGTTTCCGGTCAACAAGACAGGCA
>probe:Drosophila_2:1633771_s_at:251:11; Interrogation_Position=2187; Antisense; AGATCTTCTGTACACTTAGTTTCGG
>probe:Drosophila_2:1633771_s_at:439:459; Interrogation_Position=2219; Antisense; GATTTTTCGTTTAAGCTCGGCTCAC
>probe:Drosophila_2:1633771_s_at:463:207; Interrogation_Position=2231; Antisense; AAGCTCGGCTCACAATCGGATGTTG

Paste this into a BLAST search page for me
ACGCTACGAAGTGGCATGGTTCTTTAATAGTCTGGATGAGCCCTACGGGAAAGCCAAGGTGTCCGTGCTGTTCCAATCTATGTCGGCTTCCAAACCACAGAAACCACAGTCCACATAGGCAGCATCGGCGAGCGACTGGGCACAAACGATGGTGATGTTCGAGTTCGTCGGCCACAGTACGTGCGTCCTGGAATGCGCATGAATGCGCATCCTGTTCCGCGAGGGGAATCGGAGTTGTCACGCAGGTGTTGTGTTTCCGGTCAACAAGACAGGCAAGATCTTCTGTACACTTAGTTTCGGGATTTTTCGTTTAAGCTCGGCTCACAAGCTCGGCTCACAATCGGATGTTG

Full Affymetrix probeset data:

Annotations for 1633771_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime