FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633936_a_at:

>probe:Drosophila_2:1633936_a_at:651:359; Interrogation_Position=2307; Antisense; GCAACGCTTCGGATGCACTGAACTA
>probe:Drosophila_2:1633936_a_at:245:189; Interrogation_Position=2334; Antisense; AACAGGGTATGCAGTTCTCGGCCAT
>probe:Drosophila_2:1633936_a_at:619:55; Interrogation_Position=2361; Antisense; ATGACGATCGGGACATCTCGCAGAC
>probe:Drosophila_2:1633936_a_at:175:105; Interrogation_Position=2382; Antisense; AGACGCACTGTGCTGCTAACTATGA
>probe:Drosophila_2:1633936_a_at:87:593; Interrogation_Position=2414; Antisense; TGGTGGTTCTCTCATTGCCAGCACG
>probe:Drosophila_2:1633936_a_at:687:145; Interrogation_Position=2457; Antisense; ACAATCTGGGCCTGACTTGGTTCGA
>probe:Drosophila_2:1633936_a_at:578:471; Interrogation_Position=2476; Antisense; GTTCGATGCCGCTCGCAATGAATGG
>probe:Drosophila_2:1633936_a_at:334:205; Interrogation_Position=2515; Antisense; AAGCCGAATGCTGGTCAAGCGCCTG
>probe:Drosophila_2:1633936_a_at:474:627; Interrogation_Position=2569; Antisense; TGCCAGTGGCGCTTTTGTTTCCGTT
>probe:Drosophila_2:1633936_a_at:83:159; Interrogation_Position=2691; Antisense; ACAACAGTGTGGTCCAGTTCGTGGC
>probe:Drosophila_2:1633936_a_at:538:655; Interrogation_Position=2729; Antisense; TAAGTGAGCTGATCCCGCCGTTAAA
>probe:Drosophila_2:1633936_a_at:336:389; Interrogation_Position=2764; Antisense; GAAAACCGCTACAGTGAACCACCAG
>probe:Drosophila_2:1633936_a_at:384:103; Interrogation_Position=2787; Antisense; AGAGCCATGCCTACTATAGTTGGGA
>probe:Drosophila_2:1633936_a_at:107:677; Interrogation_Position=2803; Antisense; TAGTTGGGAGTCCACTGTTTGTCTG

Paste this into a BLAST search page for me
GCAACGCTTCGGATGCACTGAACTAAACAGGGTATGCAGTTCTCGGCCATATGACGATCGGGACATCTCGCAGACAGACGCACTGTGCTGCTAACTATGATGGTGGTTCTCTCATTGCCAGCACGACAATCTGGGCCTGACTTGGTTCGAGTTCGATGCCGCTCGCAATGAATGGAAGCCGAATGCTGGTCAAGCGCCTGTGCCAGTGGCGCTTTTGTTTCCGTTACAACAGTGTGGTCCAGTTCGTGGCTAAGTGAGCTGATCCCGCCGTTAAAGAAAACCGCTACAGTGAACCACCAGAGAGCCATGCCTACTATAGTTGGGATAGTTGGGAGTCCACTGTTTGTCTG

Full Affymetrix probeset data:

Annotations for 1633936_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720