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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1633959_s_at:

>probe:Drosophila_2:1633959_s_at:594:649; Interrogation_Position=5794; Antisense; TCAGACGCCAACCAGAGTGCGTTCA
>probe:Drosophila_2:1633959_s_at:666:429; Interrogation_Position=5808; Antisense; GAGTGCGTTCAACACATACGTTTTG
>probe:Drosophila_2:1633959_s_at:626:185; Interrogation_Position=5818; Antisense; AACACATACGTTTTGATGGTCAACT
>probe:Drosophila_2:1633959_s_at:447:441; Interrogation_Position=5832; Antisense; GATGGTCAACTAGTTCAACCAACAT
>probe:Drosophila_2:1633959_s_at:319:537; Interrogation_Position=6019; Antisense; GGTTTAACGCAGTACCAGGTTGGCA
>probe:Drosophila_2:1633959_s_at:341:665; Interrogation_Position=6031; Antisense; TACCAGGTTGGCAGTATGGGAACTT
>probe:Drosophila_2:1633959_s_at:690:705; Interrogation_Position=6054; Antisense; TTAGTGCACAACCAATGTTACCCGT
>probe:Drosophila_2:1633959_s_at:535:59; Interrogation_Position=6068; Antisense; ATGTTACCCGTAAGATCCGCTTTCA
>probe:Drosophila_2:1633959_s_at:349:95; Interrogation_Position=6080; Antisense; AGATCCGCTTTCAAATAGATTTGCC
>probe:Drosophila_2:1633959_s_at:647:661; Interrogation_Position=6110; Antisense; TAAAAAGTCTGTGGACAGCCTTCGT
>probe:Drosophila_2:1633959_s_at:602:161; Interrogation_Position=6174; Antisense; AAATATAGTCGTAAGCCTCAAGTGC
>probe:Drosophila_2:1633959_s_at:630:219; Interrogation_Position=6193; Antisense; AAGTGCTTTTCCCATCTATAGATCG
>probe:Drosophila_2:1633959_s_at:656:445; Interrogation_Position=6213; Antisense; GATCGAGCTTTACCTATAAGAAACT
>probe:Drosophila_2:1633959_s_at:262:673; Interrogation_Position=6302; Antisense; TAGAAGCGTCGGTCATCGCCACGTA

Paste this into a BLAST search page for me
TCAGACGCCAACCAGAGTGCGTTCAGAGTGCGTTCAACACATACGTTTTGAACACATACGTTTTGATGGTCAACTGATGGTCAACTAGTTCAACCAACATGGTTTAACGCAGTACCAGGTTGGCATACCAGGTTGGCAGTATGGGAACTTTTAGTGCACAACCAATGTTACCCGTATGTTACCCGTAAGATCCGCTTTCAAGATCCGCTTTCAAATAGATTTGCCTAAAAAGTCTGTGGACAGCCTTCGTAAATATAGTCGTAAGCCTCAAGTGCAAGTGCTTTTCCCATCTATAGATCGGATCGAGCTTTACCTATAAGAAACTTAGAAGCGTCGGTCATCGCCACGTA

Full Affymetrix probeset data:

Annotations for 1633959_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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