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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634006_s_at:

>probe:Drosophila_2:1634006_s_at:195:265; Interrogation_Position=4640; Antisense; CGGCCTACCACTGAGGTTTTGGTGA
>probe:Drosophila_2:1634006_s_at:214:351; Interrogation_Position=4689; Antisense; GCAGAGCGGGTGCAGCACATCCAAT
>probe:Drosophila_2:1634006_s_at:614:47; Interrogation_Position=4707; Antisense; ATCCAATGGCCATGTTCCGGTAGAA
>probe:Drosophila_2:1634006_s_at:508:85; Interrogation_Position=4732; Antisense; AGTCAGTGTAGTCTTGTTTTCCTCC
>probe:Drosophila_2:1634006_s_at:382:477; Interrogation_Position=4747; Antisense; GTTTTCCTCCACGATTTGCTTGGCG
>probe:Drosophila_2:1634006_s_at:567:505; Interrogation_Position=4778; Antisense; GTGCCTTGTTTACCCTTTTGCTGGG
>probe:Drosophila_2:1634006_s_at:604:557; Interrogation_Position=4812; Antisense; GGACAAGCGGTTTTATGTAATCCTT
>probe:Drosophila_2:1634006_s_at:537:493; Interrogation_Position=4828; Antisense; GTAATCCTTGAGAGCGTTATCCCTG
>probe:Drosophila_2:1634006_s_at:480:475; Interrogation_Position=4843; Antisense; GTTATCCCTGTGCTAGTTACACTTA
>probe:Drosophila_2:1634006_s_at:351:473; Interrogation_Position=4858; Antisense; GTTACACTTACAGCCATGGTGGGAT
>probe:Drosophila_2:1634006_s_at:382:361; Interrogation_Position=4884; Antisense; GCAAGTTGTGTGTCAGCTATTTCAA
>probe:Drosophila_2:1634006_s_at:438:39; Interrogation_Position=4917; Antisense; ATCGGACCACTATTTACGTGGCGAC
>probe:Drosophila_2:1634006_s_at:52:141; Interrogation_Position=4932; Antisense; ACGTGGCGACGTCTTCAACTGAACA
>probe:Drosophila_2:1634006_s_at:702:399; Interrogation_Position=4972; Antisense; GACAGTGCTGTGAAACGTGCGCATT

Paste this into a BLAST search page for me
CGGCCTACCACTGAGGTTTTGGTGAGCAGAGCGGGTGCAGCACATCCAATATCCAATGGCCATGTTCCGGTAGAAAGTCAGTGTAGTCTTGTTTTCCTCCGTTTTCCTCCACGATTTGCTTGGCGGTGCCTTGTTTACCCTTTTGCTGGGGGACAAGCGGTTTTATGTAATCCTTGTAATCCTTGAGAGCGTTATCCCTGGTTATCCCTGTGCTAGTTACACTTAGTTACACTTACAGCCATGGTGGGATGCAAGTTGTGTGTCAGCTATTTCAAATCGGACCACTATTTACGTGGCGACACGTGGCGACGTCTTCAACTGAACAGACAGTGCTGTGAAACGTGCGCATT

Full Affymetrix probeset data:

Annotations for 1634006_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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