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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634094_a_at:

>probe:Drosophila_2:1634094_a_at:97:265; Interrogation_Position=1908; Antisense; CAGCACAAGCAGAGCGAGCGCCATG
>probe:Drosophila_2:1634094_a_at:703:49; Interrogation_Position=1930; Antisense; ATGCCTGCGAGTTCTGTGACCACAT
>probe:Drosophila_2:1634094_a_at:231:513; Interrogation_Position=1945; Antisense; GTGACCACATCTTCTTGACGCAGAA
>probe:Drosophila_2:1634094_a_at:290:611; Interrogation_Position=1960; Antisense; TGACGCAGAAATGCCTGCAGCGCCA
>probe:Drosophila_2:1634094_a_at:722:123; Interrogation_Position=1978; Antisense; AGCGCCACATCGAGGACGATCATGT
>probe:Drosophila_2:1634094_a_at:685:549; Interrogation_Position=2012; Antisense; GGAGCCGTACCAGAACGAGTTCGAA
>probe:Drosophila_2:1634094_a_at:372:105; Interrogation_Position=2144; Antisense; AGACGATGCTCTCTATGAGGACCAC
>probe:Drosophila_2:1634094_a_at:624:607; Interrogation_Position=2159; Antisense; TGAGGACCACCTAGACGATAGCGAC
>probe:Drosophila_2:1634094_a_at:353:105; Interrogation_Position=2171; Antisense; AGACGATAGCGACGAATCCTTCACG
>probe:Drosophila_2:1634094_a_at:573:89; Interrogation_Position=2213; Antisense; GCGTAAAACCAATCCTCCCAAGGAT
>probe:Drosophila_2:1634094_a_at:123:311; Interrogation_Position=2255; Antisense; CCAAACTCGCAGTCGGGATGCTCAA
>probe:Drosophila_2:1634094_a_at:523:225; Interrogation_Position=2308; Antisense; AAGGCAAGCCTCATCACAAACTGGA
>probe:Drosophila_2:1634094_a_at:540:381; Interrogation_Position=2331; Antisense; GAACGCAACCTTAAGAATCGCCGAT
>probe:Drosophila_2:1634094_a_at:307:221; Interrogation_Position=2396; Antisense; AAGTGCATCCGTGCTTATGCTTAAA

Paste this into a BLAST search page for me
CAGCACAAGCAGAGCGAGCGCCATGATGCCTGCGAGTTCTGTGACCACATGTGACCACATCTTCTTGACGCAGAATGACGCAGAAATGCCTGCAGCGCCAAGCGCCACATCGAGGACGATCATGTGGAGCCGTACCAGAACGAGTTCGAAAGACGATGCTCTCTATGAGGACCACTGAGGACCACCTAGACGATAGCGACAGACGATAGCGACGAATCCTTCACGGCGTAAAACCAATCCTCCCAAGGATCCAAACTCGCAGTCGGGATGCTCAAAAGGCAAGCCTCATCACAAACTGGAGAACGCAACCTTAAGAATCGCCGATAAGTGCATCCGTGCTTATGCTTAAA

Full Affymetrix probeset data:

Annotations for 1634094_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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