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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634097_s_at:

>probe:Drosophila_2:1634097_s_at:563:303; Interrogation_Position=1111; Antisense; CCGGATCGGTGGGTCAATTGGTCAA
>probe:Drosophila_2:1634097_s_at:616:41; Interrogation_Position=1191; Antisense; ATCGGAGAGGTGTGCATCATGAATA
>probe:Drosophila_2:1634097_s_at:42:111; Interrogation_Position=1219; Antisense; AGCACTGGTCGGGATACTACGGAAA
>probe:Drosophila_2:1634097_s_at:445:291; Interrogation_Position=1257; Antisense; CGTAACATGCGAGATTCACTGGGAT
>probe:Drosophila_2:1634097_s_at:232:711; Interrogation_Position=1271; Antisense; TTCACTGGGATGGTATCACTCCGGG
>probe:Drosophila_2:1634097_s_at:494:455; Interrogation_Position=1303; Antisense; GATACATGGATCGAGATGGCTTCTT
>probe:Drosophila_2:1634097_s_at:80:441; Interrogation_Position=1317; Antisense; GATGGCTTCTTGTACATTATGGACC
>probe:Drosophila_2:1634097_s_at:521:459; Interrogation_Position=1389; Antisense; GATATTGAAAGCGTCATCTCAGAGA
>probe:Drosophila_2:1634097_s_at:589:99; Interrogation_Position=1409; Antisense; AGAGATGCCCCAGGTCGCCGAGGTC
>probe:Drosophila_2:1634097_s_at:82:287; Interrogation_Position=1433; Antisense; CTGTGTCTTCGGGATATGGAGCAAC
>probe:Drosophila_2:1634097_s_at:412:643; Interrogation_Position=1459; Antisense; TCTTTGGAGACGAAGCTGCTGCTGC
>probe:Drosophila_2:1634097_s_at:324:511; Interrogation_Position=1536; Antisense; GTGAGGTCTCGGACTGATTCCAAGT
>probe:Drosophila_2:1634097_s_at:535:553; Interrogation_Position=1578; Antisense; GGAGCCGTCATTGTGGATGACCTAC
>probe:Drosophila_2:1634097_s_at:450:547; Interrogation_Position=1592; Antisense; GGATGACCTACAGCGTAGTGCCAAT

Paste this into a BLAST search page for me
CCGGATCGGTGGGTCAATTGGTCAAATCGGAGAGGTGTGCATCATGAATAAGCACTGGTCGGGATACTACGGAAACGTAACATGCGAGATTCACTGGGATTTCACTGGGATGGTATCACTCCGGGGATACATGGATCGAGATGGCTTCTTGATGGCTTCTTGTACATTATGGACCGATATTGAAAGCGTCATCTCAGAGAAGAGATGCCCCAGGTCGCCGAGGTCCTGTGTCTTCGGGATATGGAGCAACTCTTTGGAGACGAAGCTGCTGCTGCGTGAGGTCTCGGACTGATTCCAAGTGGAGCCGTCATTGTGGATGACCTACGGATGACCTACAGCGTAGTGCCAAT

Full Affymetrix probeset data:

Annotations for 1634097_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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