Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634099_at:

>probe:Drosophila_2:1634099_at:488:303; Interrogation_Position=4113; Antisense; CCGCGGCGCAGAAGGTACCTGGAAA
>probe:Drosophila_2:1634099_at:730:575; Interrogation_Position=4117; Antisense; GGCGCAGAAGGTACCTGGAAAGAAA
>probe:Drosophila_2:1634099_at:437:393; Interrogation_Position=4134; Antisense; GAAAGAAAGACTGTTTCCTCCTGTT
>probe:Drosophila_2:1634099_at:567:209; Interrogation_Position=4136; Antisense; AAGAAAGACTGTTTCCTCCTGTTGT
>probe:Drosophila_2:1634099_at:2:393; Interrogation_Position=4138; Antisense; GAAAGACTGTTTCCTCCTGTTGTTT
>probe:Drosophila_2:1634099_at:557:209; Interrogation_Position=4140; Antisense; AAGACTGTTTCCTCCTGTTGTTTGA
>probe:Drosophila_2:1634099_at:202:105; Interrogation_Position=4141; Antisense; AGACTGTTTCCTCCTGTTGTTTGAT
>probe:Drosophila_2:1634099_at:100:143; Interrogation_Position=4143; Antisense; ACTGTTTCCTCCTGTTGTTTGATGG
>probe:Drosophila_2:1634099_at:490:601; Interrogation_Position=4145; Antisense; TGTTTCCTCCTGTTGTTTGATGGTT
>probe:Drosophila_2:1634099_at:601:479; Interrogation_Position=4146; Antisense; GTTTCCTCCTGTTGTTTGATGGTTT
>probe:Drosophila_2:1634099_at:707:713; Interrogation_Position=4148; Antisense; TTCCTCCTGTTGTTTGATGGTTTTC
>probe:Drosophila_2:1634099_at:284:305; Interrogation_Position=4150; Antisense; CCTCCTGTTGTTTGATGGTTTTCCA
>probe:Drosophila_2:1634099_at:46:631; Interrogation_Position=4152; Antisense; TCCTGTTGTTTGATGGTTTTCCAAA
>probe:Drosophila_2:1634099_at:524:597; Interrogation_Position=4158; Antisense; TGTTTGATGGTTTTCCAAACCACTT

Paste this into a BLAST search page for me
CCGCGGCGCAGAAGGTACCTGGAAAGGCGCAGAAGGTACCTGGAAAGAAAGAAAGAAAGACTGTTTCCTCCTGTTAAGAAAGACTGTTTCCTCCTGTTGTGAAAGACTGTTTCCTCCTGTTGTTTAAGACTGTTTCCTCCTGTTGTTTGAAGACTGTTTCCTCCTGTTGTTTGATACTGTTTCCTCCTGTTGTTTGATGGTGTTTCCTCCTGTTGTTTGATGGTTGTTTCCTCCTGTTGTTTGATGGTTTTTCCTCCTGTTGTTTGATGGTTTTCCCTCCTGTTGTTTGATGGTTTTCCATCCTGTTGTTTGATGGTTTTCCAAATGTTTGATGGTTTTCCAAACCACTT

Full Affymetrix probeset data:

Annotations for 1634099_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime