FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634127_a_at:

>probe:Drosophila_2:1634127_a_at:346:73; Interrogation_Position=1047; Antisense; AGGCACCCACTACTTTTTGATAGCA
>probe:Drosophila_2:1634127_a_at:355:715; Interrogation_Position=582; Antisense; TTCTGAGGCGGGATCATCACTGCAT
>probe:Drosophila_2:1634127_a_at:435:149; Interrogation_Position=617; Antisense; ACTTGCGTTGGCCACACTAATTACA
>probe:Drosophila_2:1634127_a_at:331:641; Interrogation_Position=651; Antisense; TCTGGTTCACAGTTTACATGCATAT
>probe:Drosophila_2:1634127_a_at:341:545; Interrogation_Position=677; Antisense; GGATCACTTTTGTCATTGGCAACGC
>probe:Drosophila_2:1634127_a_at:550:467; Interrogation_Position=746; Antisense; GTTGTATTACACTTTTCACGCTTTT
>probe:Drosophila_2:1634127_a_at:148:713; Interrogation_Position=760; Antisense; TTCACGCTTTTTCCTATTTCTCAAA
>probe:Drosophila_2:1634127_a_at:79:37; Interrogation_Position=824; Antisense; ATCATCAACATCTATGCCTGCATTC
>probe:Drosophila_2:1634127_a_at:643:49; Interrogation_Position=837; Antisense; ATGCCTGCATTCTATCACTCATAAT
>probe:Drosophila_2:1634127_a_at:718:359; Interrogation_Position=892; Antisense; GAATACCACATTCTATACGCCAAAG
>probe:Drosophila_2:1634127_a_at:190:185; Interrogation_Position=929; Antisense; AATCAAGGGCTACTGGGCAACTTCA
>probe:Drosophila_2:1634127_a_at:677:525; Interrogation_Position=943; Antisense; GGGCAACTTCATGGCCTTCATGGGA
>probe:Drosophila_2:1634127_a_at:171:293; Interrogation_Position=971; Antisense; CGAGGCCTCTGGACATTTATTTCGC
>probe:Drosophila_2:1634127_a_at:348:687; Interrogation_Position=988; Antisense; TATTTCGCCCAGCATTAGGAGTCCT

Paste this into a BLAST search page for me
AGGCACCCACTACTTTTTGATAGCATTCTGAGGCGGGATCATCACTGCATACTTGCGTTGGCCACACTAATTACATCTGGTTCACAGTTTACATGCATATGGATCACTTTTGTCATTGGCAACGCGTTGTATTACACTTTTCACGCTTTTTTCACGCTTTTTCCTATTTCTCAAAATCATCAACATCTATGCCTGCATTCATGCCTGCATTCTATCACTCATAATGAATACCACATTCTATACGCCAAAGAATCAAGGGCTACTGGGCAACTTCAGGGCAACTTCATGGCCTTCATGGGACGAGGCCTCTGGACATTTATTTCGCTATTTCGCCCAGCATTAGGAGTCCT

Full Affymetrix probeset data:

Annotations for 1634127_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720