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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634140_a_at:

>probe:Drosophila_2:1634140_a_at:506:147; Interrogation_Position=2212; Antisense; ACTAGTCTAGTCGATCAGGTTATTT
>probe:Drosophila_2:1634140_a_at:170:35; Interrogation_Position=2225; Antisense; ATCAGGTTATTTCCGTCTCTCCAAT
>probe:Drosophila_2:1634140_a_at:605:249; Interrogation_Position=2246; Antisense; CAATTTCCGATTCCTACCGATATTC
>probe:Drosophila_2:1634140_a_at:259:101; Interrogation_Position=2312; Antisense; AGAGTTGAGTGGGTTCTCTCTTCTT
>probe:Drosophila_2:1634140_a_at:352:593; Interrogation_Position=2321; Antisense; TGGGTTCTCTCTTCTTCTTTTTAAG
>probe:Drosophila_2:1634140_a_at:63:393; Interrogation_Position=2346; Antisense; GAAATGACTCTGTTTATTAAGCCTT
>probe:Drosophila_2:1634140_a_at:287:309; Interrogation_Position=2388; Antisense; CCAAACCGACTTCCTGAGATTTCAG
>probe:Drosophila_2:1634140_a_at:95:377; Interrogation_Position=2413; Antisense; GAAGACTTCCGACTTCCATCAAATA
>probe:Drosophila_2:1634140_a_at:531:401; Interrogation_Position=2423; Antisense; GACTTCCATCAAATACCCGTTACTG
>probe:Drosophila_2:1634140_a_at:73:579; Interrogation_Position=2436; Antisense; TACCCGTTACTGAGCTAGTGGAAAT
>probe:Drosophila_2:1634140_a_at:433:183; Interrogation_Position=2540; Antisense; AAAAGTGTTGGAGTGGCAGTTCTGC
>probe:Drosophila_2:1634140_a_at:129:715; Interrogation_Position=2559; Antisense; TTCTGCGCCGTTCGTAGGCGTAAAA
>probe:Drosophila_2:1634140_a_at:57:167; Interrogation_Position=2668; Antisense; AAATGTTTGGTGTGGCAGTTTTGTA
>probe:Drosophila_2:1634140_a_at:215:201; Interrogation_Position=2722; Antisense; AACCCGACCATATTTAAGACATTCT

Paste this into a BLAST search page for me
ACTAGTCTAGTCGATCAGGTTATTTATCAGGTTATTTCCGTCTCTCCAATCAATTTCCGATTCCTACCGATATTCAGAGTTGAGTGGGTTCTCTCTTCTTTGGGTTCTCTCTTCTTCTTTTTAAGGAAATGACTCTGTTTATTAAGCCTTCCAAACCGACTTCCTGAGATTTCAGGAAGACTTCCGACTTCCATCAAATAGACTTCCATCAAATACCCGTTACTGTACCCGTTACTGAGCTAGTGGAAATAAAAGTGTTGGAGTGGCAGTTCTGCTTCTGCGCCGTTCGTAGGCGTAAAAAAATGTTTGGTGTGGCAGTTTTGTAAACCCGACCATATTTAAGACATTCT

Full Affymetrix probeset data:

Annotations for 1634140_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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