FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634146_at:

>probe:Drosophila_2:1634146_at:451:679; Interrogation_Position=1236; Antisense; TTTGAATTGTAAACCTGAAGGCCGC
>probe:Drosophila_2:1634146_at:359:723; Interrogation_Position=1242; Antisense; TTGTAAACCTGAAGGCCGCACTTAT
>probe:Drosophila_2:1634146_at:431:371; Interrogation_Position=1252; Antisense; GAAGGCCGCACTTATATATGTTTAT
>probe:Drosophila_2:1634146_at:414:687; Interrogation_Position=1309; Antisense; TATATATCTGTTTGTCTGCAGGCGA
>probe:Drosophila_2:1634146_at:567:285; Interrogation_Position=1316; Antisense; CTGTTTGTCTGCAGGCGATGCTATA
>probe:Drosophila_2:1634146_at:679:575; Interrogation_Position=1329; Antisense; GGCGATGCTATATTGCAATTCACCA
>probe:Drosophila_2:1634146_at:13:303; Interrogation_Position=1385; Antisense; CCCCTTTTTCTGTAATGTGACTCGA
>probe:Drosophila_2:1634146_at:465:493; Interrogation_Position=1396; Antisense; GTAATGTGACTCGACCTGCATATGT
>probe:Drosophila_2:1634146_at:256:405; Interrogation_Position=1403; Antisense; GACTCGACCTGCATATGTGTATTAT
>probe:Drosophila_2:1634146_at:353:487; Interrogation_Position=1473; Antisense; GTAATTGTAAAATTTAGTGCGGCTT
>probe:Drosophila_2:1634146_at:258:137; Interrogation_Position=1561; Antisense; ACGAAAAACGTTTTGCTTGCATGCA
>probe:Drosophila_2:1634146_at:442:293; Interrogation_Position=1569; Antisense; CGTTTTGCTTGCATGCATAATGGAT
>probe:Drosophila_2:1634146_at:212:259; Interrogation_Position=1742; Antisense; CACATACGCATATATACTATACGAT
>probe:Drosophila_2:1634146_at:220:183; Interrogation_Position=1794; Antisense; AAGCAAAACGAGATGAACCGGAAAT

Paste this into a BLAST search page for me
TTTGAATTGTAAACCTGAAGGCCGCTTGTAAACCTGAAGGCCGCACTTATGAAGGCCGCACTTATATATGTTTATTATATATCTGTTTGTCTGCAGGCGACTGTTTGTCTGCAGGCGATGCTATAGGCGATGCTATATTGCAATTCACCACCCCTTTTTCTGTAATGTGACTCGAGTAATGTGACTCGACCTGCATATGTGACTCGACCTGCATATGTGTATTATGTAATTGTAAAATTTAGTGCGGCTTACGAAAAACGTTTTGCTTGCATGCACGTTTTGCTTGCATGCATAATGGATCACATACGCATATATACTATACGATAAGCAAAACGAGATGAACCGGAAAT

Full Affymetrix probeset data:

Annotations for 1634146_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720