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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634150_s_at:

>probe:Drosophila_2:1634150_s_at:22:617; Interrogation_Position=1679; Antisense; TGCACGACTTTGTCCAGGAGCTCCA
>probe:Drosophila_2:1634150_s_at:62:459; Interrogation_Position=1720; Antisense; GATATGGAGTTTGGCTTGCTGCGTC
>probe:Drosophila_2:1634150_s_at:604:499; Interrogation_Position=1742; Antisense; GTCTGATCTTGCTCTTCAATCCAAC
>probe:Drosophila_2:1634150_s_at:50:325; Interrogation_Position=1797; Antisense; GCGAGGCTACGTCCGCAGAGTCCAA
>probe:Drosophila_2:1634150_s_at:233:193; Interrogation_Position=1820; Antisense; AACTCTACGCTCTGTCAAGTTTGAG
>probe:Drosophila_2:1634150_s_at:689:341; Interrogation_Position=1877; Antisense; GCTTTAATGTTCTGGTGGCTCGCCT
>probe:Drosophila_2:1634150_s_at:7:67; Interrogation_Position=1933; Antisense; ATGGAGGAGCTGTTCTTCGCCAACT
>probe:Drosophila_2:1634150_s_at:396:99; Interrogation_Position=1973; Antisense; AGATGGATGCTCTTATTCCGTTCAT
>probe:Drosophila_2:1634150_s_at:319:9; Interrogation_Position=1987; Antisense; ATTCCGTTCATACTGATGACCAGCA
>probe:Drosophila_2:1634150_s_at:207:385; Interrogation_Position=2042; Antisense; GAACAGGGCGCAAGCAGATTCGCTA
>probe:Drosophila_2:1634150_s_at:652:461; Interrogation_Position=2058; Antisense; GATTCGCTAGACTGCCCAAAAGCAA
>probe:Drosophila_2:1634150_s_at:66:215; Interrogation_Position=2088; Antisense; AAGATGGACCAAGTGCGGGCAATAC
>probe:Drosophila_2:1634150_s_at:401:483; Interrogation_Position=2115; Antisense; GTAGCAACTAGGCAAATCCCATTAA
>probe:Drosophila_2:1634150_s_at:595:129; Interrogation_Position=2194; Antisense; ACCATGGGTTTATTGTTGTTCACAG

Paste this into a BLAST search page for me
TGCACGACTTTGTCCAGGAGCTCCAGATATGGAGTTTGGCTTGCTGCGTCGTCTGATCTTGCTCTTCAATCCAACGCGAGGCTACGTCCGCAGAGTCCAAAACTCTACGCTCTGTCAAGTTTGAGGCTTTAATGTTCTGGTGGCTCGCCTATGGAGGAGCTGTTCTTCGCCAACTAGATGGATGCTCTTATTCCGTTCATATTCCGTTCATACTGATGACCAGCAGAACAGGGCGCAAGCAGATTCGCTAGATTCGCTAGACTGCCCAAAAGCAAAAGATGGACCAAGTGCGGGCAATACGTAGCAACTAGGCAAATCCCATTAAACCATGGGTTTATTGTTGTTCACAG

Full Affymetrix probeset data:

Annotations for 1634150_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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