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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634177_a_at:

>probe:Drosophila_2:1634177_a_at:419:467; Interrogation_Position=1430; Antisense; GTTGATGAACTTGTGCTTGCCGACT
>probe:Drosophila_2:1634177_a_at:191:719; Interrogation_Position=1446; Antisense; TTGCCGACTGACACTTTTAGCATGT
>probe:Drosophila_2:1634177_a_at:544:657; Interrogation_Position=1514; Antisense; TAAGTCTTTTGCTTGTGGCGCCAAA
>probe:Drosophila_2:1634177_a_at:173:245; Interrogation_Position=1560; Antisense; AATTCGCGTCAACTACGAGCACGGT
>probe:Drosophila_2:1634177_a_at:346:135; Interrogation_Position=1574; Antisense; ACGAGCACGGTTTTCAGTTCGAAAT
>probe:Drosophila_2:1634177_a_at:165:163; Interrogation_Position=1595; Antisense; AAATTCGGTATCTTTGCCACTCGGA
>probe:Drosophila_2:1634177_a_at:598:309; Interrogation_Position=1610; Antisense; GCCACTCGGATTTGGATTTTCAAGT
>probe:Drosophila_2:1634177_a_at:283:217; Interrogation_Position=1631; Antisense; AAGTTCCGCAATTCGACCGCAGATA
>probe:Drosophila_2:1634177_a_at:83:503; Interrogation_Position=1657; Antisense; GTCCGCACACGATAAAATCTCGCCA
>probe:Drosophila_2:1634177_a_at:478:501; Interrogation_Position=1706; Antisense; GTCGTCGCAGTTTATGCCACAGAAA
>probe:Drosophila_2:1634177_a_at:221:119; Interrogation_Position=1772; Antisense; AGCTGCGCCATGTGTGAGTGGCCAA
>probe:Drosophila_2:1634177_a_at:564:489; Interrogation_Position=1785; Antisense; GTGAGTGGCCAACATGACTAACCCA
>probe:Drosophila_2:1634177_a_at:646:565; Interrogation_Position=1835; Antisense; GGCACAAACACTCTGATTCTCGGAA
>probe:Drosophila_2:1634177_a_at:656:241; Interrogation_Position=1894; Antisense; AATATGTATTTCCTGCTTTCTAAGA

Paste this into a BLAST search page for me
GTTGATGAACTTGTGCTTGCCGACTTTGCCGACTGACACTTTTAGCATGTTAAGTCTTTTGCTTGTGGCGCCAAAAATTCGCGTCAACTACGAGCACGGTACGAGCACGGTTTTCAGTTCGAAATAAATTCGGTATCTTTGCCACTCGGAGCCACTCGGATTTGGATTTTCAAGTAAGTTCCGCAATTCGACCGCAGATAGTCCGCACACGATAAAATCTCGCCAGTCGTCGCAGTTTATGCCACAGAAAAGCTGCGCCATGTGTGAGTGGCCAAGTGAGTGGCCAACATGACTAACCCAGGCACAAACACTCTGATTCTCGGAAAATATGTATTTCCTGCTTTCTAAGA

Full Affymetrix probeset data:

Annotations for 1634177_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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