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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634180_s_at:

>probe:Drosophila_2:1634180_s_at:259:727; Interrogation_Position=2195; Antisense; TTGTCCCACAATGTTCATCAGCATC
>probe:Drosophila_2:1634180_s_at:375:347; Interrogation_Position=2215; Antisense; GCATCGGCTACTTCATGACGGGTCA
>probe:Drosophila_2:1634180_s_at:559:363; Interrogation_Position=2247; Antisense; GAATTCCAACGATTTGCCATGTGCT
>probe:Drosophila_2:1634180_s_at:444:603; Interrogation_Position=2332; Antisense; TGTTCACCATGCAGTTGGCCATATT
>probe:Drosophila_2:1634180_s_at:575:305; Interrogation_Position=2395; Antisense; CCGGCTTCTTTATTCGGCTGAACGA
>probe:Drosophila_2:1634180_s_at:469:713; Interrogation_Position=2457; Antisense; TTCTTCAGGTACATCTTCGAGGGTC
>probe:Drosophila_2:1634180_s_at:503:715; Interrogation_Position=2472; Antisense; TTCGAGGGTCTGATGCGAGCCATCT
>probe:Drosophila_2:1634180_s_at:456:415; Interrogation_Position=2488; Antisense; GAGCCATCTATGGATACGATCGCGG
>probe:Drosophila_2:1634180_s_at:725:561; Interrogation_Position=2513; Antisense; GGAACTGGAGTGCTATGCCACAAGC
>probe:Drosophila_2:1634180_s_at:160:729; Interrogation_Position=2606; Antisense; TTGGGATATGGCTGTCCTGGGAATA
>probe:Drosophila_2:1634180_s_at:540:593; Interrogation_Position=2623; Antisense; TGGGAATATTTCTCATCCTCCTGCT
>probe:Drosophila_2:1634180_s_at:604:615; Interrogation_Position=2647; Antisense; TGCTAGCCTTCTTTGTAACCCTGAA
>probe:Drosophila_2:1634180_s_at:598:325; Interrogation_Position=2684; Antisense; GCGAGCTCTTCGGTGATATGGTTAG
>probe:Drosophila_2:1634180_s_at:365:563; Interrogation_Position=2712; Antisense; GGAATCTGGCCCTTAACAAATGTAA

Paste this into a BLAST search page for me
TTGTCCCACAATGTTCATCAGCATCGCATCGGCTACTTCATGACGGGTCAGAATTCCAACGATTTGCCATGTGCTTGTTCACCATGCAGTTGGCCATATTCCGGCTTCTTTATTCGGCTGAACGATTCTTCAGGTACATCTTCGAGGGTCTTCGAGGGTCTGATGCGAGCCATCTGAGCCATCTATGGATACGATCGCGGGGAACTGGAGTGCTATGCCACAAGCTTGGGATATGGCTGTCCTGGGAATATGGGAATATTTCTCATCCTCCTGCTTGCTAGCCTTCTTTGTAACCCTGAAGCGAGCTCTTCGGTGATATGGTTAGGGAATCTGGCCCTTAACAAATGTAA

Full Affymetrix probeset data:

Annotations for 1634180_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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