FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634184_a_at:

>probe:Drosophila_2:1634184_a_at:274:241; Interrogation_Position=5244; Antisense; AATAAAACCGCACATTCGCATCTTT
>probe:Drosophila_2:1634184_a_at:221:357; Interrogation_Position=5253; Antisense; GCACATTCGCATCTTTGCAAGTGTA
>probe:Drosophila_2:1634184_a_at:493:725; Interrogation_Position=5287; Antisense; TTGTTCTTATTACTTCGTTTGTTGA
>probe:Drosophila_2:1634184_a_at:329:365; Interrogation_Position=5310; Antisense; GAATATTTATATCCTATCAAGTGCA
>probe:Drosophila_2:1634184_a_at:71:513; Interrogation_Position=5341; Antisense; GTGAGCTACTTATATAACTTTCTGA
>probe:Drosophila_2:1634184_a_at:48:661; Interrogation_Position=5355; Antisense; TAACTTTCTGATTTCCATGGCTATT
>probe:Drosophila_2:1634184_a_at:452:67; Interrogation_Position=5371; Antisense; ATGGCTATTTTTGTGTGTGCCTATA
>probe:Drosophila_2:1634184_a_at:652:395; Interrogation_Position=5396; Antisense; GAAATTTTCTCAATCCGACATCCTT
>probe:Drosophila_2:1634184_a_at:327:151; Interrogation_Position=5413; Antisense; ACATCCTTTCTAGATCGTGTCATAC
>probe:Drosophila_2:1634184_a_at:319:393; Interrogation_Position=5446; Antisense; GAAATGAATAAGCTCCACAAATGTA
>probe:Drosophila_2:1634184_a_at:353:387; Interrogation_Position=5485; Antisense; GAAAGACTTGAGCTGGTGCGTAAAA
>probe:Drosophila_2:1634184_a_at:469:725; Interrogation_Position=5546; Antisense; TTGGATTCGCCTTGATCAACGGTTA
>probe:Drosophila_2:1634184_a_at:603:251; Interrogation_Position=5562; Antisense; CAACGGTTAAATAAGCGCTGTTTGA
>probe:Drosophila_2:1634184_a_at:128:259; Interrogation_Position=5686; Antisense; CAGAATTAAGCTGGCGAAATGCGTA

Paste this into a BLAST search page for me
AATAAAACCGCACATTCGCATCTTTGCACATTCGCATCTTTGCAAGTGTATTGTTCTTATTACTTCGTTTGTTGAGAATATTTATATCCTATCAAGTGCAGTGAGCTACTTATATAACTTTCTGATAACTTTCTGATTTCCATGGCTATTATGGCTATTTTTGTGTGTGCCTATAGAAATTTTCTCAATCCGACATCCTTACATCCTTTCTAGATCGTGTCATACGAAATGAATAAGCTCCACAAATGTAGAAAGACTTGAGCTGGTGCGTAAAATTGGATTCGCCTTGATCAACGGTTACAACGGTTAAATAAGCGCTGTTTGACAGAATTAAGCTGGCGAAATGCGTA

Full Affymetrix probeset data:

Annotations for 1634184_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720