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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634214_a_at:

>probe:Drosophila_2:1634214_a_at:76:335; Interrogation_Position=351; Antisense; GCTGATTTTCATGGTTGCTGTGCTC
>probe:Drosophila_2:1634214_a_at:132:623; Interrogation_Position=366; Antisense; TGCTGTGCTCTATGAGGCCCTGAAA
>probe:Drosophila_2:1634214_a_at:725:161; Interrogation_Position=388; Antisense; AAATTCTTCAGGGAGTGGCTTTTCT
>probe:Drosophila_2:1634214_a_at:689:81; Interrogation_Position=401; Antisense; AGTGGCTTTTCTCTTGGGACAGGAA
>probe:Drosophila_2:1634214_a_at:503:357; Interrogation_Position=540; Antisense; GCACACTCACCATCATGTTCAGGAA
>probe:Drosophila_2:1634214_a_at:528:207; Interrogation_Position=592; Antisense; AAGCTCAAGGTCTTTTGCTCCGGGA
>probe:Drosophila_2:1634214_a_at:420:535; Interrogation_Position=651; Antisense; GGTGCTCATATCCTTTTTGCTAATG
>probe:Drosophila_2:1634214_a_at:118:695; Interrogation_Position=666; Antisense; TTTGCTAATGCTCGTCTTCATGACC
>probe:Drosophila_2:1634214_a_at:43:647; Interrogation_Position=683; Antisense; TCATGACCTTCAATGTGTGGCTCTG
>probe:Drosophila_2:1634214_a_at:364:531; Interrogation_Position=736; Antisense; GGGTACTACATATTCTGCGCCTTTA
>probe:Drosophila_2:1634214_a_at:132:555; Interrogation_Position=761; Antisense; GGACCAACGTCCAGGAGCACTGCAA
>probe:Drosophila_2:1634214_a_at:350:105; Interrogation_Position=805; Antisense; AGACGAGCTGTCTAGGAGCCCTGCT
>probe:Drosophila_2:1634214_a_at:517:415; Interrogation_Position=820; Antisense; GAGCCCTGCTAATGTGTTTTTCTAA
>probe:Drosophila_2:1634214_a_at:638:585; Interrogation_Position=875; Antisense; TGGGTACCCGGCCTAATTGTTAATG

Paste this into a BLAST search page for me
GCTGATTTTCATGGTTGCTGTGCTCTGCTGTGCTCTATGAGGCCCTGAAAAAATTCTTCAGGGAGTGGCTTTTCTAGTGGCTTTTCTCTTGGGACAGGAAGCACACTCACCATCATGTTCAGGAAAAGCTCAAGGTCTTTTGCTCCGGGAGGTGCTCATATCCTTTTTGCTAATGTTTGCTAATGCTCGTCTTCATGACCTCATGACCTTCAATGTGTGGCTCTGGGGTACTACATATTCTGCGCCTTTAGGACCAACGTCCAGGAGCACTGCAAAGACGAGCTGTCTAGGAGCCCTGCTGAGCCCTGCTAATGTGTTTTTCTAATGGGTACCCGGCCTAATTGTTAATG

Full Affymetrix probeset data:

Annotations for 1634214_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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