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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634315_a_at:

>probe:Drosophila_2:1634315_a_at:728:133; Interrogation_Position=2160; Antisense; ACGCCGCAGCACAAACTGACGATGA
>probe:Drosophila_2:1634315_a_at:9:179; Interrogation_Position=2172; Antisense; AAACTGACGATGATGCACTATGGCA
>probe:Drosophila_2:1634315_a_at:470:151; Interrogation_Position=2209; Antisense; ACATGGGCACCCTGAATGGCAACAC
>probe:Drosophila_2:1634315_a_at:225:229; Interrogation_Position=2223; Antisense; AATGGCAACACCAACGGATCGGATC
>probe:Drosophila_2:1634315_a_at:301:633; Interrogation_Position=2246; Antisense; TCGCATAAACGGATCGGCCATTTTC
>probe:Drosophila_2:1634315_a_at:9:273; Interrogation_Position=2264; Antisense; CATTTTCCGGGAGCGCTACCAACAT
>probe:Drosophila_2:1634315_a_at:641:207; Interrogation_Position=2313; Antisense; GAAGCCCAGGGCCTTAAGTTTCGAG
>probe:Drosophila_2:1634315_a_at:524:101; Interrogation_Position=2336; Antisense; AGAGCGGGCCTATTCGGACAGTCAG
>probe:Drosophila_2:1634315_a_at:676:299; Interrogation_Position=2414; Antisense; CGCCCAGCGCCGGAATAATGGTGGA
>probe:Drosophila_2:1634315_a_at:139:33; Interrogation_Position=2428; Antisense; ATAATGGTGGACTCGGATCCGGAGT
>probe:Drosophila_2:1634315_a_at:581:571; Interrogation_Position=2462; Antisense; GGCTATATATGGCACGCCCACGCGT
>probe:Drosophila_2:1634315_a_at:50:323; Interrogation_Position=2477; Antisense; GCCCACGCGTGTATAGCGCCTAAAG
>probe:Drosophila_2:1634315_a_at:380:679; Interrogation_Position=2670; Antisense; TAGTACTCGTAGTGTGTGTGCTCCA
>probe:Drosophila_2:1634315_a_at:530:281; Interrogation_Position=2690; Antisense; CTCCAATGTCCAGCTTTATGTAAAT

Paste this into a BLAST search page for me
ACGCCGCAGCACAAACTGACGATGAAAACTGACGATGATGCACTATGGCAACATGGGCACCCTGAATGGCAACACAATGGCAACACCAACGGATCGGATCTCGCATAAACGGATCGGCCATTTTCCATTTTCCGGGAGCGCTACCAACATGAAGCCCAGGGCCTTAAGTTTCGAGAGAGCGGGCCTATTCGGACAGTCAGCGCCCAGCGCCGGAATAATGGTGGAATAATGGTGGACTCGGATCCGGAGTGGCTATATATGGCACGCCCACGCGTGCCCACGCGTGTATAGCGCCTAAAGTAGTACTCGTAGTGTGTGTGCTCCACTCCAATGTCCAGCTTTATGTAAAT

Full Affymetrix probeset data:

Annotations for 1634315_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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