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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634383_a_at:

>probe:Drosophila_2:1634383_a_at:527:209; Interrogation_Position=1558; Antisense; AAGAAGCCCAAGTGCTACGGCCGAT
>probe:Drosophila_2:1634383_a_at:505:577; Interrogation_Position=1576; Antisense; GGCCGATTGTCCAATTCCGTAGTGG
>probe:Drosophila_2:1634383_a_at:376:483; Interrogation_Position=1594; Antisense; GTAGTGGAGATTTGCCGGGCCATCT
>probe:Drosophila_2:1634383_a_at:467:523; Interrogation_Position=1610; Antisense; GGGCCATCTTCAATACCACCATTAT
>probe:Drosophila_2:1634383_a_at:118:71; Interrogation_Position=1658; Antisense; AGGCCTACATATATGTGTGTACCAC
>probe:Drosophila_2:1634383_a_at:534:517; Interrogation_Position=1672; Antisense; GTGTGTACCACAACCGTAGAATTTA
>probe:Drosophila_2:1634383_a_at:112:477; Interrogation_Position=1773; Antisense; GTTTTAAGTGCCGTTTGTATGATAT
>probe:Drosophila_2:1634383_a_at:274:345; Interrogation_Position=1802; Antisense; GCATTGCTCATCACCAAAATTGGCG
>probe:Drosophila_2:1634383_a_at:541:671; Interrogation_Position=1874; Antisense; TAGCGATCCCCTCAGTTAACAGGTT
>probe:Drosophila_2:1634383_a_at:52:705; Interrogation_Position=1948; Antisense; TTATGTCTATGGTTAGGTGCAACAA
>probe:Drosophila_2:1634383_a_at:593:79; Interrogation_Position=1962; Antisense; AGGTGCAACAATCCGAATTCCTTTG
>probe:Drosophila_2:1634383_a_at:110:369; Interrogation_Position=2009; Antisense; GAATGCGCTTATATGGGAACAAACT
>probe:Drosophila_2:1634383_a_at:277:527; Interrogation_Position=2054; Antisense; GGGAAGCTACACAGCTAGCAGTACA
>probe:Drosophila_2:1634383_a_at:5:441; Interrogation_Position=2093; Antisense; GATGTTTAAACATAACCGCTTAGCA

Paste this into a BLAST search page for me
AAGAAGCCCAAGTGCTACGGCCGATGGCCGATTGTCCAATTCCGTAGTGGGTAGTGGAGATTTGCCGGGCCATCTGGGCCATCTTCAATACCACCATTATAGGCCTACATATATGTGTGTACCACGTGTGTACCACAACCGTAGAATTTAGTTTTAAGTGCCGTTTGTATGATATGCATTGCTCATCACCAAAATTGGCGTAGCGATCCCCTCAGTTAACAGGTTTTATGTCTATGGTTAGGTGCAACAAAGGTGCAACAATCCGAATTCCTTTGGAATGCGCTTATATGGGAACAAACTGGGAAGCTACACAGCTAGCAGTACAGATGTTTAAACATAACCGCTTAGCA

Full Affymetrix probeset data:

Annotations for 1634383_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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