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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634522_s_at:

>probe:Drosophila_2:1634522_s_at:506:585; Interrogation_Position=1812; Antisense; TGGAAACCTATACGATGCCACCCAT
>probe:Drosophila_2:1634522_s_at:551:301; Interrogation_Position=1832; Antisense; CCCATGGTGCGCGAGTGCTTAAGAT
>probe:Drosophila_2:1634522_s_at:95:441; Interrogation_Position=1854; Antisense; GATGGCCCAGGGACTAGACAGCATG
>probe:Drosophila_2:1634522_s_at:411:719; Interrogation_Position=1891; Antisense; TTCCGTGTTGCTGCCTATGACAAGA
>probe:Drosophila_2:1634522_s_at:461:89; Interrogation_Position=1921; Antisense; AGTAGAATGGCCTTCTTCGAGCCCA
>probe:Drosophila_2:1634522_s_at:685:429; Interrogation_Position=1957; Antisense; GAGTTTGAGTTCATCTCGGGAACCA
>probe:Drosophila_2:1634522_s_at:179:87; Interrogation_Position=2011; Antisense; AGTCCGCCGGATGGCTTCATGGAAC
>probe:Drosophila_2:1634522_s_at:368:643; Interrogation_Position=2027; Antisense; TCATGGAACCGGAGGCTTGGCGCAT
>probe:Drosophila_2:1634522_s_at:413:509; Interrogation_Position=2115; Antisense; GTGCAATTCCTCCTAGTTATAGCTC
>probe:Drosophila_2:1634522_s_at:17:117; Interrogation_Position=2167; Antisense; AGCTAAAGGCGCTTACCACTTACCA
>probe:Drosophila_2:1634522_s_at:507:247; Interrogation_Position=2183; Antisense; CACTTACCACATCTTTTTTCCATTG
>probe:Drosophila_2:1634522_s_at:340:503; Interrogation_Position=2230; Antisense; GTCCCCGTGTGTGAATGTTGTGCTC
>probe:Drosophila_2:1634522_s_at:565:725; Interrogation_Position=2247; Antisense; TTGTGCTCCTCCTAACTAAATGTTC
>probe:Drosophila_2:1634522_s_at:286:243; Interrogation_Position=2332; Antisense; AATATCGTGCAGCTATTTTGTGGAC

Paste this into a BLAST search page for me
TGGAAACCTATACGATGCCACCCATCCCATGGTGCGCGAGTGCTTAAGATGATGGCCCAGGGACTAGACAGCATGTTCCGTGTTGCTGCCTATGACAAGAAGTAGAATGGCCTTCTTCGAGCCCAGAGTTTGAGTTCATCTCGGGAACCAAGTCCGCCGGATGGCTTCATGGAACTCATGGAACCGGAGGCTTGGCGCATGTGCAATTCCTCCTAGTTATAGCTCAGCTAAAGGCGCTTACCACTTACCACACTTACCACATCTTTTTTCCATTGGTCCCCGTGTGTGAATGTTGTGCTCTTGTGCTCCTCCTAACTAAATGTTCAATATCGTGCAGCTATTTTGTGGAC

Full Affymetrix probeset data:

Annotations for 1634522_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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