FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634561_s_at:

>probe:Drosophila_2:1634561_s_at:720:273; Interrogation_Position=1012; Antisense; CATTCTGGACTTTCTTTGGCGCCAC
>probe:Drosophila_2:1634561_s_at:337:453; Interrogation_Position=1076; Antisense; GATCTTTGTGATCATCGCATTCAAC
>probe:Drosophila_2:1634561_s_at:323:103; Interrogation_Position=1102; Antisense; AGACGCTAATCGAGCGAGCCGTCGA
>probe:Drosophila_2:1634561_s_at:293:507; Interrogation_Position=1234; Antisense; GTGCGACAACCGGAGCTGGAGATTC
>probe:Drosophila_2:1634561_s_at:206:565; Interrogation_Position=1261; Antisense; GGAATTTGCTGTCGCGCATCTTCGA
>probe:Drosophila_2:1634561_s_at:394:637; Interrogation_Position=1282; Antisense; TCGAGACATTCGTGATCGGCATGGT
>probe:Drosophila_2:1634561_s_at:686:347; Interrogation_Position=1300; Antisense; GCATGGTGTGCTACTTTGTGGTGTC
>probe:Drosophila_2:1634561_s_at:148:721; Interrogation_Position=1315; Antisense; TTGTGGTGTCCATCGTTAACTCCTT
>probe:Drosophila_2:1634561_s_at:589:577; Interrogation_Position=1340; Antisense; GGCCCAGAGCTACCACAAGAGGCTT
>probe:Drosophila_2:1634561_s_at:113:181; Interrogation_Position=1368; Antisense; AAAAAGCCGGCGAGCCCAGTAGCTG
>probe:Drosophila_2:1634561_s_at:297:361; Interrogation_Position=892; Antisense; GCAAGCTATTCATGGAGCGCGTTGT
>probe:Drosophila_2:1634561_s_at:302:553; Interrogation_Position=917; Antisense; GGAGCGCGTCGGATTCTTTGGCATC
>probe:Drosophila_2:1634561_s_at:601:583; Interrogation_Position=935; Antisense; TGGCATCCTGGCCTGTGCAAGCATT
>probe:Drosophila_2:1634561_s_at:369:583; Interrogation_Position=979; Antisense; TGGCGGGTATCACCTGCGGTCACTT

Paste this into a BLAST search page for me
CATTCTGGACTTTCTTTGGCGCCACGATCTTTGTGATCATCGCATTCAACAGACGCTAATCGAGCGAGCCGTCGAGTGCGACAACCGGAGCTGGAGATTCGGAATTTGCTGTCGCGCATCTTCGATCGAGACATTCGTGATCGGCATGGTGCATGGTGTGCTACTTTGTGGTGTCTTGTGGTGTCCATCGTTAACTCCTTGGCCCAGAGCTACCACAAGAGGCTTAAAAAGCCGGCGAGCCCAGTAGCTGGCAAGCTATTCATGGAGCGCGTTGTGGAGCGCGTCGGATTCTTTGGCATCTGGCATCCTGGCCTGTGCAAGCATTTGGCGGGTATCACCTGCGGTCACTT

Full Affymetrix probeset data:

Annotations for 1634561_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720