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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634842_a_at:

>probe:Drosophila_2:1634842_a_at:561:457; Interrogation_Position=1899; Antisense; GATATCGGGATGTCCTGCGACCGAA
>probe:Drosophila_2:1634842_a_at:35:621; Interrogation_Position=1935; Antisense; TGCTCTCGGCCAAATATTCCTTGTG
>probe:Drosophila_2:1634842_a_at:222:703; Interrogation_Position=1951; Antisense; TTCCTTGTGCCAGATTTACGGTCGA
>probe:Drosophila_2:1634842_a_at:328:615; Interrogation_Position=1978; Antisense; TGAAGGATACTTACTGCCACAGATG
>probe:Drosophila_2:1634842_a_at:299:151; Interrogation_Position=2013; Antisense; ACATTGCCCGCAAGGAGAGCTACTG
>probe:Drosophila_2:1634842_a_at:250:117; Interrogation_Position=2030; Antisense; AGCTACTGCCGCGAGTTTCTGGAAA
>probe:Drosophila_2:1634842_a_at:383:677; Interrogation_Position=2058; Antisense; TAGATGTACTCGATCCGGGTCTGAC
>probe:Drosophila_2:1634842_a_at:630:73; Interrogation_Position=2092; Antisense; AGGACTCATCATGTACGAGCTGCAT
>probe:Drosophila_2:1634842_a_at:234:303; Interrogation_Position=2119; Antisense; CCCCGTAATGGTTTTGGCTCAGTCG
>probe:Drosophila_2:1634842_a_at:80:649; Interrogation_Position=2137; Antisense; TCAGTCGGCATTCCAGAGCGGACAG
>probe:Drosophila_2:1634842_a_at:213:93; Interrogation_Position=2175; Antisense; AGTTCCAGCGGCGACTCAAAGAGGT
>probe:Drosophila_2:1634842_a_at:71:173; Interrogation_Position=2192; Antisense; AAAGAGGTCGTCAAGCTGCTCCAAG
>probe:Drosophila_2:1634842_a_at:618:543; Interrogation_Position=2224; Antisense; GGATATCCTGCTAATGGAACCCGAA
>probe:Drosophila_2:1634842_a_at:373:335; Interrogation_Position=2276; Antisense; GCTGCAGCCGATGCGCTAAGCAAAA

Paste this into a BLAST search page for me
GATATCGGGATGTCCTGCGACCGAATGCTCTCGGCCAAATATTCCTTGTGTTCCTTGTGCCAGATTTACGGTCGATGAAGGATACTTACTGCCACAGATGACATTGCCCGCAAGGAGAGCTACTGAGCTACTGCCGCGAGTTTCTGGAAATAGATGTACTCGATCCGGGTCTGACAGGACTCATCATGTACGAGCTGCATCCCCGTAATGGTTTTGGCTCAGTCGTCAGTCGGCATTCCAGAGCGGACAGAGTTCCAGCGGCGACTCAAAGAGGTAAAGAGGTCGTCAAGCTGCTCCAAGGGATATCCTGCTAATGGAACCCGAAGCTGCAGCCGATGCGCTAAGCAAAA

Full Affymetrix probeset data:

Annotations for 1634842_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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