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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634895_s_at:

>probe:Drosophila_2:1634895_s_at:610:273; Interrogation_Position=1409; Antisense; CATTACGCTCGATATCTGTCCAAAA
>probe:Drosophila_2:1634895_s_at:40:211; Interrogation_Position=1441; Antisense; AAGCAAACTGACACTCACGCAATTG
>probe:Drosophila_2:1634895_s_at:254:205; Interrogation_Position=1547; Antisense; AAGCGCAGGGTTTTTGGAGATTTCA
>probe:Drosophila_2:1634895_s_at:505:721; Interrogation_Position=1560; Antisense; TTGGAGATTTCATCGTGTCGTAGAA
>probe:Drosophila_2:1634895_s_at:253:151; Interrogation_Position=1663; Antisense; ACATGTCGTGTAAGATTCTGAGCAT
>probe:Drosophila_2:1634895_s_at:391:467; Interrogation_Position=1714; Antisense; GTTGTTCTCAGCAGCGTTCCAAATA
>probe:Drosophila_2:1634895_s_at:539:75; Interrogation_Position=1766; Antisense; AGGAGCAAATGTTCAGGCCAGCGGC
>probe:Drosophila_2:1634895_s_at:367:69; Interrogation_Position=1780; Antisense; AGGCCAGCGGCTGAAGATCCTCGCT
>probe:Drosophila_2:1634895_s_at:427:337; Interrogation_Position=1802; Antisense; GCTCGCCTCGGTTTGTGGCAATGTG
>probe:Drosophila_2:1634895_s_at:441:585; Interrogation_Position=1817; Antisense; TGGCAATGTGTGTGTCTCTACGGCT
>probe:Drosophila_2:1634895_s_at:686:551; Interrogation_Position=1844; Antisense; GGAGCTCGGACTCCAGATCCGGATA
>probe:Drosophila_2:1634895_s_at:257:457; Interrogation_Position=1865; Antisense; GATACGGACGCGGATGATTCGACTC
>probe:Drosophila_2:1634895_s_at:643:9; Interrogation_Position=1881; Antisense; ATTCGACTCCGGGTCGCGGCGGACA
>probe:Drosophila_2:1634895_s_at:554:287; Interrogation_Position=1900; Antisense; CGGACACGTGTGATAGTTGCAATTT

Paste this into a BLAST search page for me
CATTACGCTCGATATCTGTCCAAAAAAGCAAACTGACACTCACGCAATTGAAGCGCAGGGTTTTTGGAGATTTCATTGGAGATTTCATCGTGTCGTAGAAACATGTCGTGTAAGATTCTGAGCATGTTGTTCTCAGCAGCGTTCCAAATAAGGAGCAAATGTTCAGGCCAGCGGCAGGCCAGCGGCTGAAGATCCTCGCTGCTCGCCTCGGTTTGTGGCAATGTGTGGCAATGTGTGTGTCTCTACGGCTGGAGCTCGGACTCCAGATCCGGATAGATACGGACGCGGATGATTCGACTCATTCGACTCCGGGTCGCGGCGGACACGGACACGTGTGATAGTTGCAATTT

Full Affymetrix probeset data:

Annotations for 1634895_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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