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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634922_s_at:

>probe:Drosophila_2:1634922_s_at:554:109; Interrogation_Position=1258; Antisense; AGAAGATACGCGAACGGGCCAAGGA
>probe:Drosophila_2:1634922_s_at:462:295; Interrogation_Position=1268; Antisense; CGAACGGGCCAAGGAGCGCTACCGA
>probe:Drosophila_2:1634922_s_at:716:121; Interrogation_Position=1282; Antisense; AGCGCTACCGACTCCAGAGCATGGG
>probe:Drosophila_2:1634922_s_at:449:99; Interrogation_Position=1297; Antisense; AGAGCATGGGCAAGTCGATGAAGCT
>probe:Drosophila_2:1634922_s_at:579:95; Interrogation_Position=1330; Antisense; AGATGAAGAATAGCGCCAGTGATTT
>probe:Drosophila_2:1634922_s_at:485:267; Interrogation_Position=1346; Antisense; CAGTGATTTGGACCTCTCGAGCGGA
>probe:Drosophila_2:1634922_s_at:477:641; Interrogation_Position=1360; Antisense; TCTCGAGCGGATCGAAACTTTCGCC
>probe:Drosophila_2:1634922_s_at:42:173; Interrogation_Position=1374; Antisense; AAACTTTCGCCAACAGCGACCACGA
>probe:Drosophila_2:1634922_s_at:647:149; Interrogation_Position=1401; Antisense; ACTTCCATTGCGACTGCGACGCAAA
>probe:Drosophila_2:1634922_s_at:402:559; Interrogation_Position=1442; Antisense; GGAAACTTAAACGAATCAGTGCGAT
>probe:Drosophila_2:1634922_s_at:618:505; Interrogation_Position=1460; Antisense; GTGCGATGATTCTGATTAGCCTGGC
>probe:Drosophila_2:1634922_s_at:334:461; Interrogation_Position=1473; Antisense; GATTAGCCTGGCATTTCAATTGAAC
>probe:Drosophila_2:1634922_s_at:66:717; Interrogation_Position=1571; Antisense; TTCCCAGCCACCAAAACGACTTTGA
>probe:Drosophila_2:1634922_s_at:124:509; Interrogation_Position=1758; Antisense; TGGAATTGAAGTGACCCGTTTTTGT

Paste this into a BLAST search page for me
AGAAGATACGCGAACGGGCCAAGGACGAACGGGCCAAGGAGCGCTACCGAAGCGCTACCGACTCCAGAGCATGGGAGAGCATGGGCAAGTCGATGAAGCTAGATGAAGAATAGCGCCAGTGATTTCAGTGATTTGGACCTCTCGAGCGGATCTCGAGCGGATCGAAACTTTCGCCAAACTTTCGCCAACAGCGACCACGAACTTCCATTGCGACTGCGACGCAAAGGAAACTTAAACGAATCAGTGCGATGTGCGATGATTCTGATTAGCCTGGCGATTAGCCTGGCATTTCAATTGAACTTCCCAGCCACCAAAACGACTTTGATGGAATTGAAGTGACCCGTTTTTGT

Full Affymetrix probeset data:

Annotations for 1634922_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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