FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634988_a_at:

>probe:Drosophila_2:1634988_a_at:662:545; Interrogation_Position=2594; Antisense; GGATCCGAGTTGTCGAGGGACCCAT
>probe:Drosophila_2:1634988_a_at:127:435; Interrogation_Position=2608; Antisense; GAGGGACCCATCGAGTTATAGTGTG
>probe:Drosophila_2:1634988_a_at:22:675; Interrogation_Position=2626; Antisense; TAGTGTGGGCAAACGAGCTCGCTTG
>probe:Drosophila_2:1634988_a_at:311:723; Interrogation_Position=2648; Antisense; TTGACGCCCGAGGACACAAGTGGAT
>probe:Drosophila_2:1634988_a_at:415:451; Interrogation_Position=2670; Antisense; GATCGGAGACCATTACCCAGGAGAT
>probe:Drosophila_2:1634988_a_at:611:105; Interrogation_Position=2709; Antisense; AGACACTCCAGTCCCATGTGATAGT
>probe:Drosophila_2:1634988_a_at:81:561; Interrogation_Position=2734; Antisense; GGAAAGTCACCCGAATCACAGCGAA
>probe:Drosophila_2:1634988_a_at:122:81; Interrogation_Position=2781; Antisense; AGGTGTCCTGCTTTGGAGCCGTAGC
>probe:Drosophila_2:1634988_a_at:619:415; Interrogation_Position=2842; Antisense; GAGCCGATCCTTTAGCAATGCCAGA
>probe:Drosophila_2:1634988_a_at:307:639; Interrogation_Position=2906; Antisense; TCGTCGGCCGATCTTTTGATGAACT
>probe:Drosophila_2:1634988_a_at:261:353; Interrogation_Position=2977; Antisense; GCAGCGATTGTTCTTCATCTGAGCG
>probe:Drosophila_2:1634988_a_at:77:175; Interrogation_Position=3045; Antisense; AAAGCCTGGTGTGATTCTGGTCGGA
>probe:Drosophila_2:1634988_a_at:548:463; Interrogation_Position=3057; Antisense; GATTCTGGTCGGATTCTAGTCACAT
>probe:Drosophila_2:1634988_a_at:256:205; Interrogation_Position=3092; Antisense; AAGCCTGTTTCTTACTCGAATGTTA

Paste this into a BLAST search page for me
GGATCCGAGTTGTCGAGGGACCCATGAGGGACCCATCGAGTTATAGTGTGTAGTGTGGGCAAACGAGCTCGCTTGTTGACGCCCGAGGACACAAGTGGATGATCGGAGACCATTACCCAGGAGATAGACACTCCAGTCCCATGTGATAGTGGAAAGTCACCCGAATCACAGCGAAAGGTGTCCTGCTTTGGAGCCGTAGCGAGCCGATCCTTTAGCAATGCCAGATCGTCGGCCGATCTTTTGATGAACTGCAGCGATTGTTCTTCATCTGAGCGAAAGCCTGGTGTGATTCTGGTCGGAGATTCTGGTCGGATTCTAGTCACATAAGCCTGTTTCTTACTCGAATGTTA

Full Affymetrix probeset data:

Annotations for 1634988_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720