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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1634992_s_at:

>probe:Drosophila_2:1634992_s_at:136:1; Interrogation_Position=1412; Antisense; CATTTTGGGTGGAGGTTTCTCGCCG
>probe:Drosophila_2:1634992_s_at:183:367; Interrogation_Position=1438; Antisense; GAATCGTCGGAGGATCGGCTCGCAA
>probe:Drosophila_2:1634992_s_at:80:19; Interrogation_Position=1549; Antisense; ATTTCGCGGGCAGCAAGTGCTTTGA
>probe:Drosophila_2:1634992_s_at:568:219; Interrogation_Position=1563; Antisense; AAGTGCTTTGATGCACCAGCTCCAA
>probe:Drosophila_2:1634992_s_at:355:203; Interrogation_Position=1599; Antisense; AAGCCACCGCAGCACTGGACGTTGT
>probe:Drosophila_2:1634992_s_at:532:39; Interrogation_Position=1621; Antisense; TGTCCAGGTCGGAGGGTAAGCTTCC
>probe:Drosophila_2:1634992_s_at:726:491; Interrogation_Position=1636; Antisense; GTAAGCTTCCCATGATGATGCCGTC
>probe:Drosophila_2:1634992_s_at:496:447; Interrogation_Position=1661; Antisense; GATGCCCAAGTTCCAGGTGCCGATG
>probe:Drosophila_2:1634992_s_at:99:627; Interrogation_Position=1678; Antisense; TGCCGATGCAGACAGGCCGCTCGAA
>probe:Drosophila_2:1634992_s_at:241:443; Interrogation_Position=1716; Antisense; GATGACTTCGACACGCACAACCTAA
>probe:Drosophila_2:1634992_s_at:81:203; Interrogation_Position=1734; Antisense; AACCTAAAGTTGCTGCTCAATGTGC
>probe:Drosophila_2:1634992_s_at:714:595; Interrogation_Position=1754; Antisense; TGTGCAGTCGTAACCACACTGGTGC
>probe:Drosophila_2:1634992_s_at:428:615; Interrogation_Position=1863; Antisense; TGAATGGCAAGAACACCCGGTGGAC
>probe:Drosophila_2:1634992_s_at:553:301; Interrogation_Position=1888; Antisense; CCCGAACCCGTCAATGAGTTGCAAA

Paste this into a BLAST search page for me
CATTTTGGGTGGAGGTTTCTCGCCGGAATCGTCGGAGGATCGGCTCGCAAATTTCGCGGGCAGCAAGTGCTTTGAAAGTGCTTTGATGCACCAGCTCCAAAAGCCACCGCAGCACTGGACGTTGTTGTCCAGGTCGGAGGGTAAGCTTCCGTAAGCTTCCCATGATGATGCCGTCGATGCCCAAGTTCCAGGTGCCGATGTGCCGATGCAGACAGGCCGCTCGAAGATGACTTCGACACGCACAACCTAAAACCTAAAGTTGCTGCTCAATGTGCTGTGCAGTCGTAACCACACTGGTGCTGAATGGCAAGAACACCCGGTGGACCCCGAACCCGTCAATGAGTTGCAAA

Full Affymetrix probeset data:

Annotations for 1634992_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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