FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635020_s_at:

>probe:Drosophila_2:1635020_s_at:36:485; Interrogation_Position=1522; Antisense; GTATGTGCCGGAACTCTCAAAATAT
>probe:Drosophila_2:1635020_s_at:360:23; Interrogation_Position=1543; Antisense; ATATCCTGCTGGCTGTATTTATGAG
>probe:Drosophila_2:1635020_s_at:428:699; Interrogation_Position=1560; Antisense; TTTATGAGCCCTGGAAGGCGTCGCT
>probe:Drosophila_2:1635020_s_at:13:29; Interrogation_Position=1600; Antisense; ATACGGCTGCGTCCTCGGCACGGAT
>probe:Drosophila_2:1635020_s_at:86:685; Interrogation_Position=1625; Antisense; TATCCCCACCGGATTGTTAAACACG
>probe:Drosophila_2:1635020_s_at:258:273; Interrogation_Position=1669; Antisense; CATTAAGAGAATGGGCGCCGCCTAC
>probe:Drosophila_2:1635020_s_at:168:595; Interrogation_Position=1680; Antisense; TGGGCGCCGCCTACAAAGTAAATCG
>probe:Drosophila_2:1635020_s_at:268:663; Interrogation_Position=1698; Antisense; TAAATCGGGAGGTGCGCACTGGCAA
>probe:Drosophila_2:1635020_s_at:644:435; Interrogation_Position=1727; Antisense; GAGGAGTCGTCTTTCGAGGAGAAAT
>probe:Drosophila_2:1635020_s_at:258:135; Interrogation_Position=1755; Antisense; AAACCTCCACGTCTGGCAAGCGGAA
>probe:Drosophila_2:1635020_s_at:399:563; Interrogation_Position=1789; Antisense; GGCAACCGGAAGTGCCCCTAAGCGA
>probe:Drosophila_2:1635020_s_at:551:305; Interrogation_Position=1825; Antisense; CCTAAAATTTGTTCGCTACCTTATG
>probe:Drosophila_2:1635020_s_at:589:701; Interrogation_Position=1940; Antisense; TTCTTGATTGTTACCCTACCGAAAT
>probe:Drosophila_2:1635020_s_at:690:57; Interrogation_Position=2059; Antisense; ATGTTTAAACGCTTGTGTACTTCAC

Paste this into a BLAST search page for me
GTATGTGCCGGAACTCTCAAAATATATATCCTGCTGGCTGTATTTATGAGTTTATGAGCCCTGGAAGGCGTCGCTATACGGCTGCGTCCTCGGCACGGATTATCCCCACCGGATTGTTAAACACGCATTAAGAGAATGGGCGCCGCCTACTGGGCGCCGCCTACAAAGTAAATCGTAAATCGGGAGGTGCGCACTGGCAAGAGGAGTCGTCTTTCGAGGAGAAATAAACCTCCACGTCTGGCAAGCGGAAGGCAACCGGAAGTGCCCCTAAGCGACCTAAAATTTGTTCGCTACCTTATGTTCTTGATTGTTACCCTACCGAAATATGTTTAAACGCTTGTGTACTTCAC

Full Affymetrix probeset data:

Annotations for 1635020_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720