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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635051_a_at:

>probe:Drosophila_2:1635051_a_at:285:435; Interrogation_Position=1768; Antisense; GAGGGACGTGTTTGACCATCCACAA
>probe:Drosophila_2:1635051_a_at:94:415; Interrogation_Position=1781; Antisense; GACCATCCACAAACCAGCTTTACAG
>probe:Drosophila_2:1635051_a_at:468:113; Interrogation_Position=1796; Antisense; AGCTTTACAGCTTTACGGCTTTCCT
>probe:Drosophila_2:1635051_a_at:167:633; Interrogation_Position=1831; Antisense; TCCCATAATCAAACTGTTATTCCGT
>probe:Drosophila_2:1635051_a_at:233:109; Interrogation_Position=1853; Antisense; CGTTTTCCTTTTGAGTTTTGTGCAT
>probe:Drosophila_2:1635051_a_at:235:429; Interrogation_Position=1865; Antisense; GAGTTTTGTGCATACCTGAGAATGT
>probe:Drosophila_2:1635051_a_at:531:687; Interrogation_Position=1938; Antisense; TATTTCCGAGTGTTAGCCAAGTTAC
>probe:Drosophila_2:1635051_a_at:206:311; Interrogation_Position=1953; Antisense; GCCAAGTTACAACATGGTGACTGCT
>probe:Drosophila_2:1635051_a_at:170:621; Interrogation_Position=1974; Antisense; TGCTGCCTCAATAGCTCGTAGAATT
>probe:Drosophila_2:1635051_a_at:336:383; Interrogation_Position=2011; Antisense; GAACGTACTCTGTTTTTGATGTGAA
>probe:Drosophila_2:1635051_a_at:138:369; Interrogation_Position=2041; Antisense; GAATGTTTATAATCTGCACTGCAAT
>probe:Drosophila_2:1635051_a_at:430:361; Interrogation_Position=2061; Antisense; GCAATCTGTGCTAGAGACGAACCTA
>probe:Drosophila_2:1635051_a_at:321:409; Interrogation_Position=2076; Antisense; GACGAACCTATGAAACCAAGATGCA
>probe:Drosophila_2:1635051_a_at:165:533; Interrogation_Position=2149; Antisense; GGTGTTTACAAGGTGCAATTTTATC

Paste this into a BLAST search page for me
GAGGGACGTGTTTGACCATCCACAAGACCATCCACAAACCAGCTTTACAGAGCTTTACAGCTTTACGGCTTTCCTTCCCATAATCAAACTGTTATTCCGTCGTTTTCCTTTTGAGTTTTGTGCATGAGTTTTGTGCATACCTGAGAATGTTATTTCCGAGTGTTAGCCAAGTTACGCCAAGTTACAACATGGTGACTGCTTGCTGCCTCAATAGCTCGTAGAATTGAACGTACTCTGTTTTTGATGTGAAGAATGTTTATAATCTGCACTGCAATGCAATCTGTGCTAGAGACGAACCTAGACGAACCTATGAAACCAAGATGCAGGTGTTTACAAGGTGCAATTTTATC

Full Affymetrix probeset data:

Annotations for 1635051_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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