FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635116_a_at:

>probe:Drosophila_2:1635116_a_at:610:39; Interrogation_Position=7152; Antisense; ATCTGCTGACGCGAATGGCACAGCC
>probe:Drosophila_2:1635116_a_at:394:555; Interrogation_Position=7189; Antisense; GGACCCATTTGGCTATGACTTCGAT
>probe:Drosophila_2:1635116_a_at:680:383; Interrogation_Position=7305; Antisense; GAACATCGCCGTACAGCCAGGACGA
>probe:Drosophila_2:1635116_a_at:94:667; Interrogation_Position=7316; Antisense; TACAGCCAGGACGAGAATGCCGCCG
>probe:Drosophila_2:1635116_a_at:421:319; Interrogation_Position=7340; Antisense; GCCCTGGAAACCTTCGTGCAGAACA
>probe:Drosophila_2:1635116_a_at:651:187; Interrogation_Position=7361; Antisense; AACATGAACGCACTGCAGATCGCCA
>probe:Drosophila_2:1635116_a_at:682:97; Interrogation_Position=7377; Antisense; AGATCGCCACGGATGCGGAGTGCTC
>probe:Drosophila_2:1635116_a_at:632:277; Interrogation_Position=7399; Antisense; CTCGCGGCTGAATGGCACGGGAACT
>probe:Drosophila_2:1635116_a_at:721:609; Interrogation_Position=7499; Antisense; TGAGCCACATGACACGAGGTGCGCT
>probe:Drosophila_2:1635116_a_at:634:305; Interrogation_Position=7525; Antisense; CCTGGCCAGCAGATTGAGTTGAACT
>probe:Drosophila_2:1635116_a_at:407:427; Interrogation_Position=7540; Antisense; GAGTTGAACTCCTCACATTCATAAC
>probe:Drosophila_2:1635116_a_at:192:713; Interrogation_Position=7557; Antisense; TTCATAACAGTCTCTCACATACGCA
>probe:Drosophila_2:1635116_a_at:330:151; Interrogation_Position=7573; Antisense; ACATACGCAGACATTTCATCGATGA
>probe:Drosophila_2:1635116_a_at:266:549; Interrogation_Position=7681; Antisense; GGAGTCAATTTCAATGTTTCAACAA

Paste this into a BLAST search page for me
ATCTGCTGACGCGAATGGCACAGCCGGACCCATTTGGCTATGACTTCGATGAACATCGCCGTACAGCCAGGACGATACAGCCAGGACGAGAATGCCGCCGGCCCTGGAAACCTTCGTGCAGAACAAACATGAACGCACTGCAGATCGCCAAGATCGCCACGGATGCGGAGTGCTCCTCGCGGCTGAATGGCACGGGAACTTGAGCCACATGACACGAGGTGCGCTCCTGGCCAGCAGATTGAGTTGAACTGAGTTGAACTCCTCACATTCATAACTTCATAACAGTCTCTCACATACGCAACATACGCAGACATTTCATCGATGAGGAGTCAATTTCAATGTTTCAACAA

Full Affymetrix probeset data:

Annotations for 1635116_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720