FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635125_a_at:

>probe:Drosophila_2:1635125_a_at:501:57; Interrogation_Position=2946; Antisense; ATGAGAACCAACTCCTTGTGCGCTT
>probe:Drosophila_2:1635125_a_at:67:263; Interrogation_Position=3011; Antisense; CAGCCCGTGCAGTTCAATGTCAAGA
>probe:Drosophila_2:1635125_a_at:686:599; Interrogation_Position=3028; Antisense; TGTCAAGAACGTGCTGAGTGCCTTC
>probe:Drosophila_2:1635125_a_at:263:391; Interrogation_Position=3071; Antisense; GAAACGACTCTGGATGGCAATGCCT
>probe:Drosophila_2:1635125_a_at:329:249; Interrogation_Position=3088; Antisense; CAATGCCTGGCTGGACGAAAGTCGA
>probe:Drosophila_2:1635125_a_at:266:171; Interrogation_Position=3105; Antisense; AAAGTCGACGACTTCAGTTTGCGCC
>probe:Drosophila_2:1635125_a_at:449:91; Interrogation_Position=3120; Antisense; AGTTTGCGCCGGATCCTGAAGAAGC
>probe:Drosophila_2:1635125_a_at:25:377; Interrogation_Position=3137; Antisense; GAAGAAGCCGCGTTCAACACGTATG
>probe:Drosophila_2:1635125_a_at:420:219; Interrogation_Position=3199; Antisense; AAGTGCCGAGAAGCCCATGTTGGGT
>probe:Drosophila_2:1635125_a_at:135:473; Interrogation_Position=3224; Antisense; GTTAAGTACGCCGACGAAGCCTTGC
>probe:Drosophila_2:1635125_a_at:683:333; Interrogation_Position=3259; Antisense; GCTGGGTGCCGAGAGCAATCGCATT
>probe:Drosophila_2:1635125_a_at:87:83; Interrogation_Position=3321; Antisense; AGGGACGCAGCTCCAAGTCGACTGA
>probe:Drosophila_2:1635125_a_at:586:85; Interrogation_Position=3336; Antisense; AGTCGACTGAGGGTCCTTACAACTC
>probe:Drosophila_2:1635125_a_at:295:365; Interrogation_Position=3386; Antisense; GAATACATTATCGAGCTGAGCCCAA

Paste this into a BLAST search page for me
ATGAGAACCAACTCCTTGTGCGCTTCAGCCCGTGCAGTTCAATGTCAAGATGTCAAGAACGTGCTGAGTGCCTTCGAAACGACTCTGGATGGCAATGCCTCAATGCCTGGCTGGACGAAAGTCGAAAAGTCGACGACTTCAGTTTGCGCCAGTTTGCGCCGGATCCTGAAGAAGCGAAGAAGCCGCGTTCAACACGTATGAAGTGCCGAGAAGCCCATGTTGGGTGTTAAGTACGCCGACGAAGCCTTGCGCTGGGTGCCGAGAGCAATCGCATTAGGGACGCAGCTCCAAGTCGACTGAAGTCGACTGAGGGTCCTTACAACTCGAATACATTATCGAGCTGAGCCCAA

Full Affymetrix probeset data:

Annotations for 1635125_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720