FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635273_s_at:

>probe:Drosophila_2:1635273_s_at:358:215; Interrogation_Position=3540; Antisense; AAGATGTCCGTGACGACGACGCGCA
>probe:Drosophila_2:1635273_s_at:713:67; Interrogation_Position=3610; Antisense; ATGGCACCGAGGTCTAGTTTGGCAC
>probe:Drosophila_2:1635273_s_at:243:305; Interrogation_Position=3656; Antisense; CCGGCAGCTGGCGATGTGATGCAAT
>probe:Drosophila_2:1635273_s_at:390:445; Interrogation_Position=3735; Antisense; GATGCATTGTGATGTCGTTGCCGAC
>probe:Drosophila_2:1635273_s_at:226:353; Interrogation_Position=3768; Antisense; GCAGCAGATGCGGATCCAGTTGGAT
>probe:Drosophila_2:1635273_s_at:490:629; Interrogation_Position=3809; Antisense; TCCATGGCGGGCTGAAGCTGATGCT
>probe:Drosophila_2:1635273_s_at:18:457; Interrogation_Position=3834; Antisense; GATAACTTTATTGCGCGTATGGGAT
>probe:Drosophila_2:1635273_s_at:628:151; Interrogation_Position=3926; Antisense; ACATCCCCTGTTGCGGCTTGTAAAA
>probe:Drosophila_2:1635273_s_at:73:241; Interrogation_Position=3950; Antisense; AATAGCCGGCGGAAGGATTCTGTTC
>probe:Drosophila_2:1635273_s_at:328:313; Interrogation_Position=3985; Antisense; GCCACTGCGTGACTTGTGTGCCAAA
>probe:Drosophila_2:1635273_s_at:71:517; Interrogation_Position=4000; Antisense; GTGTGCCAAACGACTGATGTAGGTT
>probe:Drosophila_2:1635273_s_at:264:189; Interrogation_Position=4043; Antisense; AACATGCAACACACCAGTTCTTCTT
>probe:Drosophila_2:1635273_s_at:158:265; Interrogation_Position=4057; Antisense; CAGTTCTTCTTCTGGTCTGGAAAAT
>probe:Drosophila_2:1635273_s_at:493:161; Interrogation_Position=4090; Antisense; AAATATGTAATCTTCGGCGAGTTGG

Paste this into a BLAST search page for me
AAGATGTCCGTGACGACGACGCGCAATGGCACCGAGGTCTAGTTTGGCACCCGGCAGCTGGCGATGTGATGCAATGATGCATTGTGATGTCGTTGCCGACGCAGCAGATGCGGATCCAGTTGGATTCCATGGCGGGCTGAAGCTGATGCTGATAACTTTATTGCGCGTATGGGATACATCCCCTGTTGCGGCTTGTAAAAAATAGCCGGCGGAAGGATTCTGTTCGCCACTGCGTGACTTGTGTGCCAAAGTGTGCCAAACGACTGATGTAGGTTAACATGCAACACACCAGTTCTTCTTCAGTTCTTCTTCTGGTCTGGAAAATAAATATGTAATCTTCGGCGAGTTGG

Full Affymetrix probeset data:

Annotations for 1635273_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720