FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635293_s_at:

>probe:Drosophila_2:1635293_s_at:138:35; Interrogation_Position=1011; Antisense; ATCACTTCTATCAGCTTGGACGCTA
>probe:Drosophila_2:1635293_s_at:26:557; Interrogation_Position=1028; Antisense; GGACGCTATCACGAAGCACGGGCAA
>probe:Drosophila_2:1635293_s_at:52:457; Interrogation_Position=1071; Antisense; GATACTATCATTACCTGAGCAGACA
>probe:Drosophila_2:1635293_s_at:321:351; Interrogation_Position=1089; Antisense; GCAGACAGTTCGGTTGGCAGCAGCT
>probe:Drosophila_2:1635293_s_at:468:567; Interrogation_Position=1104; Antisense; GGCAGCAGCTGAATCCTCTCAAAAA
>probe:Drosophila_2:1635293_s_at:399:289; Interrogation_Position=1162; Antisense; CGGCTTCTCCGTGGTAAACAACATT
>probe:Drosophila_2:1635293_s_at:442:53; Interrogation_Position=1188; Antisense; ATGCAGCCGCTGTGGACCTAAAAGT
>probe:Drosophila_2:1635293_s_at:130:379; Interrogation_Position=1247; Antisense; GAAGCCATTCGTCTAGATCCGAAAT
>probe:Drosophila_2:1635293_s_at:86:487; Interrogation_Position=1272; Antisense; GTAGCAAGGCTTTCTATCGACGCGC
>probe:Drosophila_2:1635293_s_at:340:671; Interrogation_Position=1322; Antisense; TACGAGGAGGCCATAAACGATCTGA
>probe:Drosophila_2:1635293_s_at:560:39; Interrogation_Position=1341; Antisense; ATCTGAAAACGGCTCACAATCTCCT
>probe:Drosophila_2:1635293_s_at:364:165; Interrogation_Position=1453; Antisense; AAATCTTTTTGCCTAGCTGGCAGCC
>probe:Drosophila_2:1635293_s_at:180:585; Interrogation_Position=1470; Antisense; TGGCAGCCAGTCACCATTTTCATGG
>probe:Drosophila_2:1635293_s_at:322:531; Interrogation_Position=976; Antisense; GGTGGAACTTCTCACGGGCATTCGC

Paste this into a BLAST search page for me
ATCACTTCTATCAGCTTGGACGCTAGGACGCTATCACGAAGCACGGGCAAGATACTATCATTACCTGAGCAGACAGCAGACAGTTCGGTTGGCAGCAGCTGGCAGCAGCTGAATCCTCTCAAAAACGGCTTCTCCGTGGTAAACAACATTATGCAGCCGCTGTGGACCTAAAAGTGAAGCCATTCGTCTAGATCCGAAATGTAGCAAGGCTTTCTATCGACGCGCTACGAGGAGGCCATAAACGATCTGAATCTGAAAACGGCTCACAATCTCCTAAATCTTTTTGCCTAGCTGGCAGCCTGGCAGCCAGTCACCATTTTCATGGGGTGGAACTTCTCACGGGCATTCGC

Full Affymetrix probeset data:

Annotations for 1635293_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720