FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1635322_a_at:

>probe:Drosophila_2:1635322_a_at:308:447; Interrogation_Position=1541; Antisense; GATCCCCTACAGAGCCACGTGAAGG
>probe:Drosophila_2:1635322_a_at:264:295; Interrogation_Position=1567; Antisense; CGAGGATCCGGGTCTTGTGTCATAG
>probe:Drosophila_2:1635322_a_at:42:595; Interrogation_Position=1582; Antisense; TGTGTCATAGTAGCCAGTCTCCAGT
>probe:Drosophila_2:1635322_a_at:437:279; Interrogation_Position=1607; Antisense; CTCTTCAGGGCCAAGCAACATTCAA
>probe:Drosophila_2:1635322_a_at:436:251; Interrogation_Position=1618; Antisense; CAAGCAACATTCAACTCGCCAATAG
>probe:Drosophila_2:1635322_a_at:106:17; Interrogation_Position=1659; Antisense; ATTTTCATCTATACTGACCACTCGC
>probe:Drosophila_2:1635322_a_at:515:337; Interrogation_Position=1682; Antisense; GCTCTCTCTAGCTGCTGCTTAAGAT
>probe:Drosophila_2:1635322_a_at:209:341; Interrogation_Position=1698; Antisense; GCTTAAGATCCCCTGTGAAAGTAGA
>probe:Drosophila_2:1635322_a_at:43:523; Interrogation_Position=1738; Antisense; GTGGCCACTGAAAACGAACGATGCG
>probe:Drosophila_2:1635322_a_at:445:619; Interrogation_Position=1773; Antisense; TGCTTGAGGACGGACTCTCCAACTG
>probe:Drosophila_2:1635322_a_at:83:195; Interrogation_Position=1793; Antisense; AACTGCCATCATTAGCCAGCTCTTA
>probe:Drosophila_2:1635322_a_at:58:707; Interrogation_Position=1818; Antisense; TTATGGCTGGCCAACATTCTGGCCG
>probe:Drosophila_2:1635322_a_at:624:577; Interrogation_Position=1838; Antisense; GGCCGGAGCAACAACGGACGCATTT
>probe:Drosophila_2:1635322_a_at:285:171; Interrogation_Position=1901; Antisense; AAAGCTCAATCATCGGAAACCACAT

Paste this into a BLAST search page for me
GATCCCCTACAGAGCCACGTGAAGGCGAGGATCCGGGTCTTGTGTCATAGTGTGTCATAGTAGCCAGTCTCCAGTCTCTTCAGGGCCAAGCAACATTCAACAAGCAACATTCAACTCGCCAATAGATTTTCATCTATACTGACCACTCGCGCTCTCTCTAGCTGCTGCTTAAGATGCTTAAGATCCCCTGTGAAAGTAGAGTGGCCACTGAAAACGAACGATGCGTGCTTGAGGACGGACTCTCCAACTGAACTGCCATCATTAGCCAGCTCTTATTATGGCTGGCCAACATTCTGGCCGGGCCGGAGCAACAACGGACGCATTTAAAGCTCAATCATCGGAAACCACAT

Full Affymetrix probeset data:

Annotations for 1635322_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720